Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4759 ATGAATAATTTTCATCCTAATACTTTTCTTCACTTAAACCAACCAGATAATGAGAATATTCATCATCTGAATCTAGATCTTGTTCTTGAACCTTCTTCTTCTTCTTCATCATCATCTTCATCTATGGAGCAAAGGATATTCTCATGCAACTATTGTCAAAGAAAGTTTTATAGCTCTCAAGCTTTGGGAGGACACCAAAATGCTCACAAGCTTGAAAGGACACTTGCAAAGAAGAGTAGGGAGATGAGTTCAGCCATGCAATCTTCTTATGCTGAATTACCAGAACACCCTTCAAACTTTTCTACTAATTACCATCTTGGAAGTCATGGAAATGCTCATCTTGACAACAACTATAGACAAGGTCATGTGATGAGGCATGGTGGAAGAAAAGATCAGTTTAGTTATGGTAATTCTAAGGAAGGTGGGGCTTCTTGGTCAAGGGGTTATAATAGTAATTCTGAAAATGTTCAGGAGGATATTAGCCAACTTGATTTGTCCTTAAGGCTTTGA 510 0.3686 MNNFHPNTFLHLNQPDNENIHHLNLDLVLEPSSSSSSSSSSMEQRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSAMQSSYAELPEHPSNFSTNYHLGSHGNAHLDNNYRQGHVMRHGGRKDQFSYGNSKEGGASWSRGYNSNSENVQEDISQLDLSLRL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4759 169 MobiDBLite consensus disorder prediction 137 162 - -
Mtr4g4759 169 PANTHER ZINC FINGER PROTEIN JAGGED 21 169 IPR045320 GO:0003700
Mtr4g4759 169 MobiDBLite consensus disorder prediction 122 169 - -
Mtr4g4759 169 Gene3D Classic Zinc Finger 28 98 - -
Mtr4g4759 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Mtr4g4759 169 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Mtr4g4759 169 PANTHER ZINC FINGER PROTEIN 2 21 169 - -
Mtr4g4759 169 SUPERFAMILY beta-beta-alpha zinc fingers 43 74 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4759 Mtr-Chr4 61621910 61622930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4759 3 169 C2H2 Transcription Factor Family AT5G57520 49.425 3.16e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr4g4759 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4759 - - vra:106768043 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4759 4 61621910 61622930 Mtr4g4759 4 61621910 61622930 ECH