Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4758 ATGTCACCATCTCCATCTCCTCCACAACAAGAACAAAAACAAGAATTCATATTCCGTTCTAAACTTCCCGATATTGAAATTCCAACACACCTTCCATTACACTCTTACTGTTTCCAAAACCTCTCTCAATTCAACAACCGTCCATGTCTCATCAACGGCGACACCGGCGAAACCCTAACCTACTCCGACGTCCACCTCACCGTCCGCAAAATCGCAGCCGGTCTAAACACTCTTGGAATCCAACAAGGTGATGTCATCATGATCGTCCTCCGTAACTCTCCTCAATTTGCACTCACCTTCCTCGGTGCCTCCTTCCGCGGCGCGGTTATCACCACCGCAAATCCCTTCTACACCTCATCGGAGCTCGCTAAACAAGCCACCGCAACAAAATCTAAACTCATCATAACACAATCCGTATATCTCAATAAAATCAACGATTTCGCAAAACTCATCGACATCAAAATCGTGTGCATTGATTCATCACCGGAGGAAGATGAAAATGTTGTGGATTTTTCTGTTTTAACAAATGCTGATGAAAACGAATTACCAGAAGTAAAAATAAACCCAAACGATGTAGTTGCGTTACCGTTTTCTTCAGGAACTTCTGGTTTACCAAAAGGTGTTATGTTAACACATGAAAATTTAGTTACAACAATATCACAGTTAGTTGACGGTGAAAATCCACACCAATACACTAACTACGAAGATGTCTTACTTTGTGTGTTACCTATGTTTCATATCTATGCACTAAATTCGATTTTACTATGTGGTATTCGTTCTGGTGCTGCTGTTTTAATTGTTGAGAAATTTGAGATAACAAAGGTTTTGGAACTTATTGAGAAGTATAAGGTGACGGTAGCGTCATTTGTGCCACCTATTGTTTTAGCATTGGTAAAAAGTGGAGAATCTATGAGATACGATTTGTCATCTATTAGAGTGATGATAACTGGTGCTGCTCCCATGGGAATGGAACTTGAACAAGCTGTTAAAGATAGGTTGCCACGAACTGTACTTGGACAGGGATATGGAATGACAGAGGCAGGACCACTTTCAATTAGCTTGGCATTTGCAAAGGAACCATTCAAGACAAAGCCTGGCGCATGTGGCACAGTTGTAAGAAACGCTGAGATGAAAATAGTGGACACAGAAACTGGTGCTTCCCTTCCAAGAAACAAAGCTGGTGAAATTTGTATTAGAGGCACCAAGGTTATGAAAGGATACCTAAATGACCCTGAGGCGACAAAGAGAACTATAGACAAAGAAGGATGGCTACACACAGGTGACATTGGTTTAATTGACGACGACGACGAACTCTTCATTGTTGATCGATTAAAGGAATTGATTAAATACAAAGGATACCAAGTAGCTCCTGCTGAGCTCGAAGCATTGTTGATTGCTCATCCAAACATTTCTGATGCTGCTGTCGTACCATTGAAAGATGAAGCTGCTGGAGAAGTTCCAGTTGCTTTTGTTGTAAGATCAAATGGTTCAAAGATCAGCGAGGATGAAATCAAGCAATACATATCGCAACAGGTTGTATTTTACAAGAGAATAAACAGAGTTTACTTCACAGAAACAATTCCTAAAGCCGCCTCAGGAAAAATTCTGCGAAAGGAATTAACTGCGAGACTTAACGAAGGTCTAGTAGTTGCCACAAATTAA 1662 0.4085 MSPSPSPPQQEQKQEFIFRSKLPDIEIPTHLPLHSYCFQNLSQFNNRPCLINGDTGETLTYSDVHLTVRKIAAGLNTLGIQQGDVIMIVLRNSPQFALTFLGASFRGAVITTANPFYTSSELAKQATATKSKLIITQSVYLNKINDFAKLIDIKIVCIDSSPEEDENVVDFSVLTNADENELPEVKINPNDVVALPFSSGTSGLPKGVMLTHENLVTTISQLVDGENPHQYTNYEDVLLCVLPMFHIYALNSILLCGIRSGAAVLIVEKFEITKVLELIEKYKVTVASFVPPIVLALVKSGESMRYDLSSIRVMITGAAPMGMELEQAVKDRLPRTVLGQGYGMTEAGPLSISLAFAKEPFKTKPGACGTVVRNAEMKIVDTETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKELTARLNEGLVVATN* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4758 553 CDD 4CL 27 540 - -
Mtr4g4758 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 544 - -
Mtr4g4758 553 Gene3D - 445 548 IPR045851 -
Mtr4g4758 553 Gene3D - 9 444 IPR042099 -
Mtr4g4758 553 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Mtr4g4758 553 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Mtr4g4758 553 Pfam AMP-binding enzyme 40 450 IPR000873 -
Mtr4g4758 553 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 12 544 - -
Mtr4g4758 553 SUPERFAMILY Acetyl-CoA synthetase-like 15 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4758 Mtr-Chr4 61609988 61615983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4758 15 512 Monolignol Biosynthesis Gene Families AT1G51680 64.484 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4758 K01904 - gmx:100810418 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4758 4 61609988 61615983 Mtr4g4758 4 61609988 61615983 ECH