Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4737 ATGGACAAATCCTCTTCTTCACCTCCTACAAACACTAACAACACCTCCCTCGCTTTCTCTCTTTCCAATAATAACTTTCCTAATCCTTCACACTCTTCTTCCTCTCACCTCTCTCTTTTCCACTCCTTCACACCTTATCCTTCCTCTATAATACCACCATCTCTCACCCTCACAGGAAGCAACAACCCCGTGGAAGCTTCACCAGAGGCAACAGACGGAGGAACCACCAACCTCTCCATATTCACCGGCGGCCACAAGTTTGAGGACTTCTTAGGAAGCTCCGTTGCACCAACAAGAACCGCTGCCGCAACGTGTGCACCGACGCAGCTTCAGCAGTTTTCCACCGACAATGATGTATATAATTCTGAGCTCAAGAAAACAATAGCCGCTTGCTTTCCTGGTGGCTACCCCACCGAACCAAACTCCGAACCTCAAAAGCCTTCTCCTAAAAAAACTGTCGATACCTTCGGACAACGCACCTCCATCTATCGCGGTGTCACGAGACATAGATGGACGGGGAGATATGAAGCACATCTATGGGACAATAGTTGCAGAAGGGAAGGACAAAGTAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGATAAGGAAGAGAAAGCAGCTAGAGCTTATGATCTTGCTGCTCTCAAGTACTGGGGTCCAACGACCACTACCAACTTTCCAATTTCCAACTATGAGAAGGAGATTGATGACATGAAGAACATGACTAGACAAGAATTTGTTGCTTCTCTACGAAGGAAGAGTAGTGGTTTCTCAAGAGGAGCATCAATTTACAGAGGGGTAACAAGACACCACCAGCATGGCCGATGGCAGGCAAGAATAGGCAGAGTTGCCGGAAACAAAGACCTCTACCTTGGCACTTTCAGCACTCAAGAAGAAGCTGCAGAAGCGTATGATATTGCAGCAATCAAATTTAGAGGACTAAATGCAGTAACAAATTTTGACATGAGTCGGTACGACGTAAAGAGTATTGCAAATTGTTCTCTTCCCATAGGAGGTTTATCAAACAAGAACAATAAAAATTCCACAGATTGTGTATCAGAAACCAAAATCAATGAACCAATTCAATCCGACGAAATAGATCATCCATCTTCAACTTCGTCAGCAACAACTTTAAGCTTCGCCTTACCTATTAAACAAGACCCTTCTACCGATTATTGGTCCAATATTCTCGGCTTCCATAATAATCCTAGTGCTGTTACTACCACTACCATACCATTCAACATGGATTTTTCTGCTCATGTACCTTCAAATACCAACAGTGATAATCCCCACAATGCAGCATTTTTCAGTGGATCAGGTATATTTGTTCAGCAACAAAATATGAACGGAAGCAGTGGTTCCAATTCTTCATCTTCGTCGTCAGCTTCAACGAGTTCAATTCCATTCGCAACGCCAATATTTTCTTTAAATAGTAATAGTAGTAGTTATGGAAATGGAAATAACTGGATTGGACACACATTCCAAACACATGCAAAGCCAAGTCTATTTCAAACGCCAATATTTGGAATGGAATGA 1539 0.4301 MDKSSSSPPTNTNNTSLAFSLSNNNFPNPSHSSSSHLSLFHSFTPYPSSIIPPSLTLTGSNNPVEASPEATDGGTTNLSIFTGGHKFEDFLGSSVAPTRTAAATCAPTQLQQFSTDNDVYNSELKKTIAACFPGGYPTEPNSEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKEIDDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANCSLPIGGLSNKNNKNSTDCVSETKINEPIQSDEIDHPSSTSSATTLSFALPIKQDPSTDYWSNILGFHNNPSAVTTTTIPFNMDFSAHVPSNTNSDNPHNAAFFSGSGIFVQQQNMNGSSGSNSSSSSSASTSSIPFATPIFSLNSNSSSYGNGNNWIGHTFQTHAKPSLFQTPIFGME* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4737 512 Pfam AP2 domain 264 314 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 Pfam AP2 domain 162 220 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g4737 512 Gene3D AP2/ERF domain 264 324 IPR036955 GO:0003700|GO:0006355
Mtr4g4737 512 Gene3D AP2/ERF domain 162 230 IPR036955 GO:0003700|GO:0006355
Mtr4g4737 512 SUPERFAMILY DNA-binding domain 263 324 IPR016177 GO:0003677
Mtr4g4737 512 SUPERFAMILY DNA-binding domain 161 230 IPR016177 GO:0003677
Mtr4g4737 512 MobiDBLite consensus disorder prediction 135 154 - -
Mtr4g4737 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 31 466 - -
Mtr4g4737 512 ProSiteProfiles AP2/ERF domain profile. 264 322 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 ProSiteProfiles AP2/ERF domain profile. 162 228 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 31 466 - -
Mtr4g4737 512 CDD AP2 161 230 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 SMART rav1_2 264 328 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 SMART rav1_2 162 234 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 PRINTS Ethylene responsive element binding protein signature 163 174 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 PRINTS Ethylene responsive element binding protein signature 304 324 IPR001471 GO:0003700|GO:0006355
Mtr4g4737 512 CDD AP2 263 324 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4737 Mtr-Chr4 61376915 61380795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4737 118 512 AP2-EREBP Transcription Factor Family AT5G57390 57.604 1.81e-153 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mtr4g4737 AP2 3.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4737 K09285 - gmx:100803558 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4737 4 61376915 61380795 Mtr4g4737 4 61376915 61380795 ECH