Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4735 ATGGCTACCGATTCGTCTTCCCAAGTTGCTCTTGATCCTTCTAAATTTAGTAAATTGAGTATGGAGGAAAAAAGAGAGCTTGTATATGAAATATCTAAATCGTCTCATGATGGTGCATCTGAGATACTACAGTCATGGAGCCGTCAAGAGATTTTACAAATATTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACAAAGGTGAAAATTATCGAAAATCTTCTGAAAATTGTTTCCGAAAAGAAATCAAGTGGCCATGATATTGCCACCGACCCTGAACCACATTCTTTTCCTGAAAATGGTCAGAAACCTGCTAAAAGGCAGAGAAAAATTGAGAATCCATCTCGGTTAGCTGTTCCTGAAAACAATGTTTTTGTCAATAACAGTGGCGATGTGAATCATAATACCTCATACTGCAAAAACTCAGCATGCAAGGCTACGCTAAATCAAGGAGATGCATTTTGCAAAAGGTGTTCATGTTGTATTTGTCATCAATATGACGACAACAAAGACCCTAGCCTGTGGTTAATATGCAGCTCTGAAGCTCCATTTCCTGGTGTTTCTTGCGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGAATTGGCAAAGATGGCAAACGCCCCAAACATGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAATTGATGGTAGCAAAGGATGCCAGACGTGTGGATATACTATGTTACCGTGTCTCCTTAAGCCAAAAACTTTTACAAGGGACTGAAATGTATCGAGAACTTTATGAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCACCACTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCTTCGGGACCTGAAGTTCAGAAACTCTGTGGTGTCGCTCTTGAATCACTTGATTCAATGCTTTCCAAAAGGATCTCGCCTCTGTCTCCCAATCCAACCATTCAAGATGCAAGTTTACTAGCACCAAATATGGTGAGGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGTGTTCGGAAGATGCTTCTGGAGAAAATAGTGCTAGTTATGCTGTGTGGCATCGCAAAGCTGATGATGTGAACTATCCATTGGACCCGACTTGCACGATTCTCCTACCAAATAGAAGACTTGGCATCGAGGGTCTACTTCCAGATACAGAATACAGATTCAAATTTGTTTCCAATGATCCGAGGATGTTGTGTGCGTGTGAGGTTCAAGTCTTGACAGCGCATGGTGAAGATGAAGTTCCAAATTGCTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACGGTAGCAGCCTTTCCAATCCGTCATCAGTAGAAGATGAAACTAATCACAGCGACCAGACTGATAATCGATCAGATAATTATCCTTCTTATCACAAGGACAGTGACCAGCTTGCTCCTGGAAATCTATCTAATGATGCGAATAACTGTTCTGGTTTGGGTGGAGTAGGAATCCCCAACAATGCAGATTCCTTGTCAGACAAGCAAGCTGATGTAGGAACAACTGCCATCATAGCTAGTTCTGATGTACCAAAGCTTGAAAACAAGCATTCACAAGAGGAACAAGTAGCCGAGGACATGAGCACCGAGGATGGGTCAGTTCCAACGGGAAGGGAATGTGTTCCGTTAGTAGGTAGCTCAAAAGGGGGATTGCCTAATACTCCCTGCAAGTTGGAGATAATTAAAGATGGTCGGGGAAGAAAAGGTAGATCCAAATTCAGTGGCAAAGATCTAGAAAATGGATCCGGGAAAAGGAATGTCCTTCGAGATGGAAGCACATCCAAGAAGAGAAGTAGTGAAAGGCAAGACGAGGGCTGCAAGGCTAATAGTTTCTCAGATCAGGATTTCGAGTATTATGTGAAGGTGATTAGAAGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCTCTCAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCTTGAAGATTCCGCTTCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTGTATCAAACAAGAGATCATCAGTGCCTGCAGGATTCTGCATGAAGCTTTGGCATTGA 2193 0.4236 MATDSSSQVALDPSKFSKLSMEEKRELVYEISKSSHDGASEILQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSSGHDIATDPEPHSFPENGQKPAKRQRKIENPSRLAVPENNVFVNNSGDVNHNTSYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHDGSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTEMYRELYEIVDEAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQKLCGVALESLDSMLSKRISPLSPNPTIQDASLLAPNMVRFEDVTATSLTVILCSEDASGENSASYAVWHRKADDVNYPLDPTCTILLPNRRLGIEGLLPDTEYRFKFVSNDPRMLCACEVQVLTAHGEDEVPNCSATERSQSPVTNGSSLSNPSSVEDETNHSDQTDNRSDNYPSYHKDSDQLAPGNLSNDANNCSGLGGVGIPNNADSLSDKQADVGTTAIIASSDVPKLENKHSQEEQVAEDMSTEDGSVPTGRECVPLVGSSKGGLPNTPCKLEIIKDGRGRKGRSKFSGKDLENGSGKRNVLRDGSTSKKRSSERQDEGCKANSFSDQDFEYYVKVIRRLECEGHIEKNFRQKFLTWYSLRATSQEIRIVKIYVDTFLEDSASLAEQLVDTFSECVSNKRSSVPAGFCMKLWH* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4735 730 CDD PHD_VIN3_plant 162 227 - -
Mtr4g4735 730 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 730 IPR044514 GO:0010048|GO:0040029
Mtr4g4735 730 MobiDBLite consensus disorder prediction 103 117 - -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 447 472 - -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 88 117 - -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 596 638 - -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 541 567 - -
Mtr4g4735 730 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 473 489 - -
Mtr4g4735 730 MobiDBLite consensus disorder prediction 445 504 - -
Mtr4g4735 730 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4735 Mtr-Chr4 61338280 61344078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4735 10 608 PHD Gene Family AT4G30200 46.802 6.90e-157 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4735 - - gmx:100794721 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4735 4 61338280 61344078 Mtr4g4735 4 61338280 61344078 ECH