Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4730 ATGAGGTATATAAGAACAGGCAGCTTCAAGAGGCTCTTCTCATTTACCAAACGTGGTTTAGGGGAACCAGTTCTGAGTCCCAAAGGTGAAGAAAATGAAAAGAGCTTGAAGATTCTTCCATATGAAGAAGAAACTTGTCAAAAACCAACATGGAAATGTTTCTCTTATGAAGAGTTGTTTGATGCTACCAATGGCTTCAACTCAGAAAATATGGTTGGAAAAGGTGGTTATGCTGAGGTTTACAAGGGAACATTGAAAAATGGTGAAGAAATTGCTGTGAAGAGATTAACAAGAGCTTCAAAGGATGAAAGAAAAGAGAAAGAGTTTTTGACAGAGATTGGAACAATTGGTCATGTTCGTCATTCCAATGTTTTATCTCTTCTAGGATGTTGTATTGACAATGGACTTTACTTTGTTTTTGAACTATCCACCACTGGTTCTGTTTCATCTATTCTTCATGATGAACAGTTGGCTCCTTTAGATTGGAAAACAAGACATAAAATAGTTGTTGGGACAGCGCGTGGACTTCACTACTTGCACAAAGGTTGCAAGAGGAGAATAATCCATAGAGATATCAAGGCATCAAACATTTTATTGACAAAAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCACAATGGACTCATCACTCAATTGCTCCAATAGAAGGAACATTTGGACATTTGGCACCAGAATACTACTTGCATGGAGTTGTGGATGAGAAAACAGATGTATTTGCTTTTGGTGTGTTCTTGCTAGAAGTCATTTCTGGTAGGAAACCTGTGGATGTGTCTCACCAAAGTTTACATAGCTGGGCTAAACCAATTTTGAACAAAGGTGATATAGAAGAGCTAGTAGATGCAAGGCTTGAAGGAGAATATGATGTAACACAGTTAAAGAGACTTGCCTTTGCTGCCTCTCTATGCATCCGGGCATCTTCCACTTGGCGACCCTCCATGACTGAGGTATTGGAGATAATGGAGGAGGGAGAGATGGATAAAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAACAAGAGGAAGAGTTCTGGGGTTTTGAGGATCTGGAATATGAATATGACAGTTCCTTTTCAATGTCTTTAATTGATTCAATTGAAAGTAATTAA 1146 0.3857 MRYIRTGSFKRLFSFTKRGLGEPVLSPKGEENEKSLKILPYEEETCQKPTWKCFSYEELFDATNGFNSENMVGKGGYAEVYKGTLKNGEEIAVKRLTRASKDERKEKEFLTEIGTIGHVRHSNVLSLLGCCIDNGLYFVFELSTTGSVSSILHDEQLAPLDWKTRHKIVVGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDVSHQSLHSWAKPILNKGDIEELVDARLEGEYDVTQLKRLAFAASLCIRASSTWRPSMTEVLEIMEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLIDSIESN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4730 381 Gene3D Phosphorylase Kinase; domain 1 37 141 - -
Mtr4g4730 381 SMART serkin_6 66 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4730 381 Pfam Protein tyrosine and serine/threonine kinase 69 331 IPR001245 GO:0004672|GO:0006468
Mtr4g4730 381 PANTHER OS08G0249100 PROTEIN 34 363 - -
Mtr4g4730 381 PANTHER OS04G0654600 PROTEIN 34 363 - -
Mtr4g4730 381 SUPERFAMILY Protein kinase-like (PK-like) 44 333 IPR011009 -
Mtr4g4730 381 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Mtr4g4730 381 ProSiteProfiles Protein kinase domain profile. 66 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4730 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mtr4g4730 381 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4730 Mtr-Chr4 61315743 61319757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4730 54 338 Trihelix Transcription Factor Family AT1G70460 44.068 7.91e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr4g4730 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4730 - - gmx:100819499 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4730 4 61315743 61319757 Mtr4g4730 4 61315743 61319757 ECH