Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4722 ATGGAAGATGCACAACAAAATAAACGTAGACGTGTTTATTCTGTGGAACCAAACACAATAGTGCAAACTATATTTGCTAGAAACTATTTAAGTTATTTAGTTCCAGCATTGATGAAGATAAAGGAAAATAATATTTCTTCAAAGGAAAATATTAAGAATGTTAAGTATGAAGTGGACATGGCAATGGTTTCATCAGCACAAGGTTTTGCATGGAGTGATGGCCTTAAACTCAAGCTTCAAAAGGAATGTAATGTCAATGATGTAGCTACAAACAGTAGAAGCATAATTGAGAATGAAGCTAGTGAAGATGAGGAGAAGATGAAGAACTTAATAAGGTTGATACCTGGTGGAGAAGATATTTGTGATGAACAAGTTGTTAATGAATTAGAAAGTTATATAAGATGTTTACAAATGCAGGTGAATGTTCTTCAATGTTTACTAGCAGAGACATGTTGA 456 0.3289 MEDAQQNKRRRVYSVEPNTIVQTIFARNYLSYLVPALMKIKENNISSKENIKNVKYEVDMAMVSSAQGFAWSDGLKLKLQKECNVNDVATNSRSIIENEASEDEEKMKNLIRLIPGGEDICDEQVVNELESYIRCLQMQVNVLQCLLAETC* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4722 151 Coils Coil 93 113 - -
Mtr4g4722 151 PANTHER TRANSCRIPTION FACTOR BHLH146 2 89 - -
Mtr4g4722 151 PANTHER TRANSCRIPTION FACTOR BHLH146 90 149 - -
Mtr4g4722 151 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 89 IPR044660 GO:0006355
Mtr4g4722 151 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 90 149 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4722 Mtr-Chr4 61214921 61215996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4722 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 36.646 5.76e-26 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4722 - - mtr:MTR_4g127700 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4722 4 61214921 61215996 Mtr2g1459 2 16013096 16014111 PCT