Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4717 ATGATAGCAAACATGTCATCATCCTCCTCCTCCTCAAAAGTAACATTGAAAAGTTGTTACTCTGTGAGACCAATGGAACCAACATGGTATGGTCGATTACCATTATCCGAATGGGATCAAATTGGAAACATAACACACGTTTCAACAATTTACTTTTACCGCCCCCCACAAAAATGGCTTACCTCCCCCAATAAAATCGCCACCACTTTGAAAGACTCATTGAGCAAAGTCCTTGTGCCGTTTTATCCACTAGCCGGTCGTTTACAATGGAAAGAAAGCGGTCGTTTTGATGTCGAATGCAACTCATTGGGTGCTCAATTCATCGAAGCAGAATCGTCGTTAACCTTATCCGAACTAGGTGACTTTTCACCTTCTTGTGAATATTATCCTTACCTTATCCCGCACATCGATTACACACGCCCAATTGAAGACATTCCATTGGTTATTGTTCAGCTCACAAATTTCAAATGTGGTGGTGCTAGCATTAGTTTGTTAATCTCACACGCGGTTGCTGATGGACCAAGCGCATTGCATTTCACTTCTGAGTGGGCACGACTTGCGCGTGGCGAGCCTGTGAGAACAATGCCATATTTTGATATAAACGTGTTGTCGTCAAGGTCAAATGTTAATGTTAATGAATGGGAGTTTAATGAACCTCCGTTATTGTTAGGAAATTCGAATAATGTTGAAGAAAGGAAGAAAAAAACAACGGTGGCTATGCTAAAAGTGAGTAAAACACAAGTTGAAAAGTTGAGAAAAACAGCAAATGAAAGTTGGGAAAAACCTAGCAATGGTCGAGGTTATACGAGATATGAAACCTTAACCGGTCATGTTTGGAGAAGTGCAAGTAAAGCTAGAGGGCATGCAAATGACCAACAAACTTCGCTTGGTGTTTGTGTTGATTGGAGGAATCGTGTGGAGCCTAATTTACCAAAAGGGTATTTTGGGAATGGGACTTTGGATGTTGTGGCTACTAGTCTTGCAGGGGATTTAATATCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCGATTGAGAAAGTGAATGATGAGTATGTGAGAATGGGAATCGAGTATTTTAAGAAGCAAGAGGATTTGACTAAGTTTCAAGATCTTCATGCTAAGATGGGGAGTGATGATAAAGGGCCATTTTATGGGAATCCAAATTTAGGAGTGGTTAGTTGGTTGACATTGCCAATTTATGGACTTGATTTTGGATGGGGGAAAGAAGTTTATATGGGGCCAGGAACACATGATTCAGATGGAGATTCTTTGCTTCTTCCTAGTTATGATGATGATGGATCTTTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATATGGATGCATTCAAGAGGCATTTTTATCAAGACATTGTGTGA 1386 0.404 MIANMSSSSSSSKVTLKSCYSVRPMEPTWYGRLPLSEWDQIGNITHVSTIYFYRPPQKWLTSPNKIATTLKDSLSKVLVPFYPLAGRLQWKESGRFDVECNSLGAQFIEAESSLTLSELGDFSPSCEYYPYLIPHIDYTRPIEDIPLVIVQLTNFKCGGASISLLISHAVADGPSALHFTSEWARLARGEPVRTMPYFDINVLSSRSNVNVNEWEFNEPPLLLGNSNNVEERKKKTTVAMLKVSKTQVEKLRKTANESWEKPSNGRGYTRYETLTGHVWRSASKARGHANDQQTSLGVCVDWRNRVEPNLPKGYFGNGTLDVVATSLAGDLISKPLGYASSRIREAIEKVNDEYVRMGIEYFKKQEDLTKFQDLHAKMGSDDKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDSDGDSLLLPSYDDDGSLLVAICLQEVHMDAFKRHFYQDIV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4717 461 Gene3D - 225 459 IPR023213 -
Mtr4g4717 461 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 16 460 - -
Mtr4g4717 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 460 - -
Mtr4g4717 461 Gene3D - 8 218 IPR023213 -
Mtr4g4717 461 Pfam Transferase family 13 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4717 Mtr-Chr4 61180462 61182007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4717 13 458 Monolignol Biosynthesis Gene Families AT5G48930 37.029 4.60e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4717 K13065 - gmx:100777007 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4717 4 61180462 61182007 Mtr4g4717 4 61180462 61182007 ECH