Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4701 ATGTCTTCTTGTTTTAGTGGAACAGGAGGAAGAACCATCGGTTTGGATTTAGATATAGTTAAATCATCACCACCATGTTCATGGAGTCGAACATCACAAACATCTTCTTCACCTTCTTCAACAATCTCCGAATCAAGCAATTCACCACTTGCAATCTACACCACTAAACCCAGAACCCCAAGAAAACGACCCAATCAAACCTACAACGAAGCTGCAACACTCCTTAACACCGCATACCCAAACCTCTTCTCCAATCCAAATCTCAAAACAAACCCAAACCATAACAATAATAAATCCACCAAATTGGAAAAAGCTTATGAATTCGACTCTTCTGAACTTCTTTTACCTTTCAGAGTATTGGACACGTCATCGTCTTTTTTACTTCACGGCAAGCCCGATTTTCCATCGGAGCCTAAACCGGTGAAACCATGTCAGAGTCCCGGAGAGATTAGTTCAATGGTCAATTGTCTTGAATTGAATGATGATGATGATGATTTTGATGCGGAATCGATACTCGACGAGGAAATTGAAGAAGGAATTGATAGCATCATGGGAGGTAGAATTGAGGAGAATGAATCTAATGTCTCTTCTTCTCATCCATGGATTGGTTTTGGCGGGAAATTCGATTTCCGGTTAGGATTACAGAGAGGTGGAGTGAGAGCTCTTCGCCATGTTGATGAAGGGAATTGGTGGAATTTTCCGGCGGTTGATATGCTTAAAATTTCGCCCAAAATATGCAGTGTCGGTGGTAAGACGACGGCGGCGGCGGTGACGGAGAAGAAGAAAAAGAAGAAGGTTGTTGCAGTGGAGAGACTGAATGCAGAATTGAAAGAAATGGAATCGCCAAAGTTGAAAAGTGGATTGTTGTTGAAATTGAATTACGACGGCGTTCGGAAAGCTTGGTCTGACCGAGGAACGCCATTCGCCGATGACAGCCCTGTCTCCGATGCTTCGGGAAACGATGTCAATGCACGGTTGTCACAAATAGATTTGTTATGGGAGAATGGAGGAGGAAGTGGTGTAAGAGAAGCCAGCGTGATGCGTTACAAAGAAAAGCGTCGTACACGCCTCATCTCTAAGAAAATCAGATATCAAGTTAGAAAGGTCAATGCAGATCGACGGCCAAGAATGAAGGGGCAATTTGTTAGGAGGCTGAATGCTAGCTCAAATGCACACAAATGA 1182 0.4332 MSSCFSGTGGRTIGLDLDIVKSSPPCSWSRTSQTSSSPSSTISESSNSPLAIYTTKPRTPRKRPNQTYNEAATLLNTAYPNLFSNPNLKTNPNHNNNKSTKLEKAYEFDSSELLLPFRVLDTSSSFLLHGKPDFPSEPKPVKPCQSPGEISSMVNCLELNDDDDDFDAESILDEEIEEGIDSIMGGRIEENESNVSSSHPWIGFGGKFDFRLGLQRGGVRALRHVDEGNWWNFPAVDMLKISPKICSVGGKTTAAAVTEKKKKKKVVAVERLNAELKEMESPKLKSGLLLKLNYDGVRKAWSDRGTPFADDSPVSDASGNDVNARLSQIDLLWENGGGSGVREASVMRYKEKRRTRLISKKIRYQVRKVNADRRPRMKGQFVRRLNASSNAHK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4701 393 ProSiteProfiles CCT domain profile. 342 384 IPR010402 GO:0005515
Mtr4g4701 393 Pfam CCT motif 342 383 IPR010402 GO:0005515
Mtr4g4701 393 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 388 - -
Mtr4g4701 393 PANTHER OS02G0148000 PROTEIN 1 388 - -
Mtr4g4701 393 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4701 Mtr-Chr4 61031564 61034934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4701 258 384 C2C2-CO-like Transcription Factor Family AT1G25440 39.716 3.02e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr4g4701 CCT 4.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4701 - - aprc:113845796 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4701 4 61031564 61034934 Mtr4g4701 4 61031564 61034934 ECH
Mtr4g4701 4 61031564 61034934 Mtr2g1505 2 16637253 16638715 PCT