Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4700 ATGTGTACGTCAGTGAACATAGTTAATTATCAAGTAAGAGTCTTAGTCGAAGTTTGCATTAAAGATGAAGGGTTTTGGGGCTCGTACTTCAAGGCCAAAATTGTTGTATGCCTTGAGAATGGGAAATATGTGGTTCGTTACAAGGACCTTCTTGAGGAAGACAAATTTGGACCTCTCGAGGAGACACTTTTATCAAAGGACCTTCGTCCAATGCCTCCATGTGTCCAAAATCCTCCCAAGTTCCAACTCAACCAAAAAGTTGATGTTTTTTGCAAAGATGGATGGTGGTTAGGGAAAATCATTGGCAAGAAGGAATTCAGGAAAAAGAAGTATAAAATTAGTGTGTACTTTCCCACTATTCCTCGAAAGAGGTTATGTTGTTGTGATCAGATCCGAGTTCATCATGAGTTGTCTGGAGGAGAATGGATCACCAAACCTTAA 441 0.3991 MCTSVNIVNYQVRVLVEVCIKDEGFWGSYFKAKIVVCLENGKYVVRYKDLLEEDKFGPLEETLLSKDLRPMPPCVQNPPKFQLNQKVDVFCKDGWWLGKIIGKKEFRKKKYKISVYFPTIPRKRLCCCDQIRVHHELSGGEWITKP* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4700 146 Pfam Agenet domain 15 73 IPR008395 -
Mtr4g4700 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 143 - -
Mtr4g4700 146 PANTHER - 9 143 - -
Mtr4g4700 146 SMART agenet_At_2 8 76 IPR014002 -
Mtr4g4700 146 SMART agenet_At_2 79 139 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4700 Mtr-Chr4 61010571 61011011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4700 22 120 PHD Transcription Factor Family AT5G58610 26.891 7.46e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4700 - - mtr:MTR_4g079980 137.117