Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4682 ATGGTTGTAGATCCGGTAGTTATTCCAAAGTTGAGGATGGATGAACAAAGAGCTATTCAAGAAGCTGCTTCTGCTGGATTGAAAAGTATGGAGCAACTAATTCGTGTGCTTTCTTCTCAAACTTCTTCTTCTTCTTCTTCTTCAAATCAACTTAACCAACTAGATCTGGTCAATAAACTTGATTGTACTGAAATTACTGATTTCACTGTTTCTAAGTTTAAAACGGTTATTAACTTGTTAAATCGAACCGGTCACGCTCGTTTTCGTCGTGCACCTTCTTCTCCTCCTTGTTCTTCTTATCAATTTCAATCTCAATCTCAACCTGAGAAATTCAAGACTCAACCACAGTCAACTACTCTTGATTTTGCAAAACCGATTCAATTAGTTAAGTCAAATCCAAATCCCAATCTCAAACCTAAAACTAATCAATCTACTGATTTATCTGTTTCTCAATACTCCAAATCAAAGGAAGCTTATAGCATCTCTACCACTACTTCTTCTTTCATGTCCACCATCACCGGAGATGGAAGCGTTTCCGACGGTAAAATAGGTCCTATCATTTCCTCTGGCAAGCCTCCTCTAGCTTCATCTCACCGGAAAAGGTGTCACGAAGCCACAATCTCTGGCAAAGTCTCATCCTCCGGTCACTGCCATTGCTCCAAGAGAAGGAAATCTCGTGTGAAGAGAACAATTCGTGTTCCGGCGATAAGTTCAAAGGTCGCTGATATACCATCAGACGAATTTTCGTGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTACAAGTGCAGTAGCTTCAAAGGATGTCCGGCGAGGAAGCATGTAGAAAGAGCACAAGACGATCCCAATATGCTTGTTGTTACTTACGAGGGAGAGCACCGTCACGCACAAACCGTCGTAACTGGCGCCGGATTCATATCTCAGCCTCTTTGA 954 0.4172 MVVDPVVIPKLRMDEQRAIQEAASAGLKSMEQLIRVLSSQTSSSSSSSNQLNQLDLVNKLDCTEITDFTVSKFKTVINLLNRTGHARFRRAPSSPPCSSYQFQSQSQPEKFKTQPQSTTLDFAKPIQLVKSNPNPNLKPKTNQSTDLSVSQYSKSKEAYSISTTTSSFMSTITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATISGKVSSSGHCHCSKRRKSRVKRTIRVPAISSKVADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSSFKGCPARKHVERAQDDPNMLVVTYEGEHRHAQTVVTGAGFISQPL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4682 317 MobiDBLite consensus disorder prediction 129 149 - -
Mtr4g4682 317 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4682 317 MobiDBLite consensus disorder prediction 87 117 - -
Mtr4g4682 317 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4682 317 Pfam Plant zinc cluster domain 199 242 IPR018872 -
Mtr4g4682 317 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 314 - -
Mtr4g4682 317 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 314 IPR044810 GO:0003700
Mtr4g4682 317 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g4682 317 Gene3D WRKY domain 230 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g4682 317 MobiDBLite consensus disorder prediction 94 117 - -
Mtr4g4682 317 SUPERFAMILY WRKY DNA-binding domain 242 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4682 Mtr-Chr4 60838874 60840438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4682 1 307 WRKY Transcription Factor Family AT2G24570 51.343 2.03e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g4682 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4682 - - gmx:732589 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4682 4 60838874 60840438 Mtr4g4682 4 60838874 60840438 ECH
Mtr5g0618 5 5986582 5988635 Mtr4g4682 4 60838874 60840438 PCT