Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4681 ATGGGAAACTGCTTGACTACAAGTCTTCAATCCTCAGGCGATTGTCCCAACTCTAGTACTGCCCCTGACAACAACAATCAATCAGGGAGTATTCTGTTTTCTGCTGGTCTCAGCAACTTAAGATTGATAAGGAATGGCAATTCCACATCTCTTGGGCATAGCAGCAACTCTGGAGGAAATAGCAGACTATTTAGTAGTAGTAATAATCACTCAACAGGCAATAATACAAGTACATCCTTTTGGGGCTCTGAGAATAGCCAGGCCTCTCGAATAAGAGATGAGGACGAGTTTCCTTATGGGCATATCTTGGATGCTTCAAACTTGAAAGTTTTTACTTTGGCAGAACTGAAAGCAGCCACTAGAAATTTCCGTCAAGATACTCTGTTAGGAGAGGGTGGGTTTGGTAAAGTATTCAAGGGTTTTATTAAGGAGAGAGCAGAATCCAAAAAAGGAGAGGGTTTGACTATTGCCATCAAGAAATTGAATACTAACAGCATGCAAGGAGTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCCAACCTTGTAAAGCTGTTGGGATTTGGGCGTGAGGAAGATCAGCTTTTTCTGGTGTATGAGTTTATGCACCGTGGCAGCTTGGATAACCACCTATATGGAAGAGGTTCAAATGTTCAGTCACTTTCATGGGACAGAAGGCTGAAAGTTATGATTGGAGCAGCCAGGGGACTAAATTTCCTTCACTCCTTGGAGAAGAAAATTATATACAGGGATTTGAAGCCCTCAAATATACTTCTTGACAAGGCTTCCACAGCAAAGTTATCAGACTTTGGCTTGGCCAAATCTGGTCCTTCTGATGATCACACTCATGTATCAACACGGGTTGTGGGATCACACGGCTATGCTGCTCCGGAGTACGTTGCAACAGGTCATTTGTACGTGAAAAGTGATGTGTACGGATATGGGATTGTGTTGTTGGAGATATTAACAGGCAAGCGGATAGGCGAGATAACACGCCTTAGTCAGCCAAAGTCCTTACGTGACTGGCTCAAATCAAATCTTTTAAATAGAGGGAAGTTGAGAAGCAACATGGATGCAAAGTTGGAAGGAAGGTATCCACCAAACTTAGCTTCACAGGTAGCTCAACTTGCTTTCAAATGCATCCAAACAGAACCCAAAATTAGGCCATCAATGAAGGAAGTTGTTGAAACATTAGAAAGTATCGAAGCAGCCAATGAGAAACCGGCTGATAATAGAAAGAAGACTACTAACTCCAAGGCAGTTCAACAACAACATGGCCAACCAGATGGTGGTTAA 1311 0.4272 MGNCLTTSLQSSGDCPNSSTAPDNNNQSGSILFSAGLSNLRLIRNGNSTSLGHSSNSGGNSRLFSSSNNHSTGNNTSTSFWGSENSQASRIRDEDEFPYGHILDASNLKVFTLAELKAATRNFRQDTLLGEGGFGKVFKGFIKERAESKKGEGLTIAIKKLNTNSMQGVAEWQSEVNFLGRLSHPNLVKLLGFGREEDQLFLVYEFMHRGSLDNHLYGRGSNVQSLSWDRRLKVMIGAARGLNFLHSLEKKIIYRDLKPSNILLDKASTAKLSDFGLAKSGPSDDHTHVSTRVVGSHGYAAPEYVATGHLYVKSDVYGYGIVLLEILTGKRIGEITRLSQPKSLRDWLKSNLLNRGKLRSNMDAKLEGRYPPNLASQVAQLAFKCIQTEPKIRPSMKEVVETLESIEAANEKPADNRKKTTNSKAVQQQHGQPDGG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4681 436 MobiDBLite consensus disorder prediction 407 436 - -
Mtr4g4681 436 MobiDBLite consensus disorder prediction 420 436 - -
Mtr4g4681 436 ProSiteProfiles Protein kinase domain profile. 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4681 436 MobiDBLite consensus disorder prediction 1 27 - -
Mtr4g4681 436 Gene3D Phosphorylase Kinase; domain 1 107 206 - -
Mtr4g4681 436 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 436 - -
Mtr4g4681 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Mtr4g4681 436 MobiDBLite consensus disorder prediction 51 87 - -
Mtr4g4681 436 SUPERFAMILY Protein kinase-like (PK-like) 102 403 IPR011009 -
Mtr4g4681 436 PANTHER OS01G0588500 PROTEIN-RELATED 12 436 - -
Mtr4g4681 436 Pfam Protein tyrosine and serine/threonine kinase 126 403 IPR001245 GO:0004672|GO:0006468
Mtr4g4681 436 ProSitePatterns Protein kinases ATP-binding region signature. 129 160 IPR017441 GO:0005524
Mtr4g4681 436 SMART serkin_6 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4681 436 Gene3D Transferase(Phosphotransferase) domain 1 207 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4681 Mtr-Chr4 60806065 60809464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4681 109 403 Glycoside Hydrolase AT3G07070 44.595 6.15e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g4681 PK_Tyr_Ser-Thr 9.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4681 - - gmx:100813304 624.394