Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4674 ATGTCAATACCGACCAAGACGGCTCAACTTCAACTTCAACTTCAACAAGAATACATTCTTCTAACAATGCCTCGTAGATTACTTCAACTCCAAGAGACACCTCCTTCATCGCCGCACCACGTCTCAGGAGCTTTGTACTTTTTCCTCGGAGTGATCGTAGTGCTTGTCATATTGCTCATTATTCTCTTTGTATTCTGGAAGCGTTTTAGACGTGGCAGTGGCAAAACAGAAGAACTACCGGAGGAGACAGCTCCACCACCACCTAGTCAGACACAGAAGCAAGAAGAGGTGATGAAGAGGATTATCCCAACTAATCAACAGTCAGGATTCATGGAGTTCATTAGTGGGAATCTTAGGACAATTAGCTACTTTGATTTCCAGACATTGAGAAAAGCCACCAAGAATTTCCACCGCAGATATCTTCTTGGAAGTGGTGGATTTGGCCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTAGTTGCTTGTAAGAAATTGTCTCTTGACAAATCTCACCAAGGAGAAAGAGAATTTCTAGCAGAAGTGAGAATGATCACAAGCATCCAGCATAAAAATCTTGTTCGCCTTCTCGGATGTTGCTCAGATGGACCTCAAAGAATACTTGTTTACGAATACATGAAGAACAGAAGTTTGGACTTCTTTATACATGGGAAGAGTGATGAATTTCTTAATTGGAGCACTAGATTCCAAATTATTCTTGGAGTAGCACGAGGATTGCAATACCTTCACGAGGATTCACATGTAAGAATTGTTCACCGAGATATTAAAGCAAGCAACATTCTTCTTGACGAAAAGTTTCAGCCGAGGATTGGAGATTTTGGACTAGCTAGGTTCTTCCCTGAAGACCAAGCTTACCTTAGCACTCAGTTTGCCGGAACATTAGGTTATACAGCTCCTGAATATGCAATTAGAGGAGAACTATCTGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTTTGCTTGAAATCATCAGCTGCAGAAAAAACACAGATCTCACTTTACCATCAGATATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGGTAATGGAACTTATAGATCCAAAGCTGATAGAAAAAGGATATGTAGAAAAAGATGTTATGCAAGCATTCCATGTGGCCTTTTTATGCCTTCAGCCACATCCAGATTTAAGACCTGCTATGTCACAGATTGTAGCATTGTTAACATTTAAAATTGATATGGTTACAACACCAATGAGGCCAGCTTTCCTTGATCGAAGGCGCGTAATGGACGATGAGAATCATTCTTGGGAAGTCATATCTGAGGTTTTACAAACTCCTGCAGCTAGTGATTCTACGTTATAA 1362 0.4075 MSIPTKTAQLQLQLQQEYILLTMPRRLLQLQETPPSSPHHVSGALYFFLGVIVVLVILLIILFVFWKRFRRGSGKTEELPEETAPPPPSQTQKQEEVMKRIIPTNQQSGFMEFISGNLRTISYFDFQTLRKATKNFHRRYLLGSGGFGPVYQGKLADGRLVACKKLSLDKSHQGEREFLAEVRMITSIQHKNLVRLLGCCSDGPQRILVYEYMKNRSLDFFIHGKSDEFLNWSTRFQIILGVARGLQYLHEDSHVRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIISCRKNTDLTLPSDMQYLPEYAWKLYEKSMVMELIDPKLIEKGYVEKDVMQAFHVAFLCLQPHPDLRPAMSQIVALLTFKIDMVTTPMRPAFLDRRRVMDDENHSWEVISEVLQTPAASDSTL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4674 453 SMART serkin_6 136 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4674 453 Gene3D Transferase(Phosphotransferase) domain 1 213 416 - -
Mtr4g4674 453 CDD STKc_IRAK 142 408 - -
Mtr4g4674 453 Gene3D Phosphorylase Kinase; domain 1 96 212 - -
Mtr4g4674 453 ProSiteProfiles Protein kinase domain profile. 136 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4674 453 PANTHER RECEPTOR-LIKE KINASE 114 422 - -
Mtr4g4674 453 SUPERFAMILY Protein kinase-like (PK-like) 118 410 IPR011009 -
Mtr4g4674 453 MobiDBLite consensus disorder prediction 76 95 - -
Mtr4g4674 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Mtr4g4674 453 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 114 422 - -
Mtr4g4674 453 Pfam Protein tyrosine and serine/threonine kinase 141 406 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4674 Mtr-Chr4 60743373 60746402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4674 124 423 Receptor kinase-like Gene Family AT1G56120 49.333 3.74e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g4674 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4674 - - ccaj:109792436 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4674 4 60743373 60746402 Mtr4g4674 4 60743373 60746402 ECH
Mtr4g4674 4 60743373 60746402 Mtr2g1529 2 16980476 16986922 PCT