Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4666 ATGGCTCCGAGAATCCTACTCTGCGGCGACGTTAACGGCCGTCTTAACCAGCTCTTCAAGCGCGTCTCATCGGTGAACAAATCCGCGGGCCCATTCGACGCACTCTTATGCGTTGGCCAGTTCTTCCCTGACTCTCCGGACCTGCTTGATGACTTCACGGCATACATTGAAGGTGGTGGATCCCACATTCCCCTCCCTACTTACTTCATCGGCGATTACGGCGTCGCCGCCCCCAAATTTTTGTTGGCGGCTTCTAAGGACTCCGTCAACTGTGGTTTCAAGATGGATGGGTTAAGGGTTTGCGATAATTTGTTTTGGTTGAAAGGCAGTGGAAAATTCAACCTCTTCGGGTTATCTGTCACCTATTTATCTGGTAGGAAATCGTCAACTGGTCAGCAGTTTGGAACTTACAGTGAAGACGATGCTGATGCTTTGCGTGCGATAGCTGAGGAATCTGGAGTTGTTGATCTGTTCTTGACTAACGAGTGGCCAAGTGGGGTCACAAATGGAGTAGCTGCTTCAGACATTCCTGCCGGATTCTCAGATTCTACAGGCAGCGATTCAACCATATCAGAGTTAGTGCAAGAGATTAAACCACGTTATCATATTGCAGGTTCTAAAGGTATATACTATGCCCGTGAACCATATTCAAATGTTGATGCCGTGCACGTTACTCGTTTCATAGGGCTTGCGTCTGTTGGAAATAAAGATAAGCAGAAATTTATTCATGCGATTTCTCCAACACCTGCATCTACCATGTCTTCAACCGAGATTGCCATGAAAACCACCAATACCACCTTATCACCATACACATTTGCGGGGGGAAAAGCTTCTCCGAAGGATACGGTAAAGAGATCCAGTGACGGTATCTCTGATTCTCAACATTGGAGATATGATGTTCCACAAAAGCGACAGAAACATGAAGCTGGAGACAAGTTGTGTTTCAAATTTGTCTCTTCCGGCTCTTGTCAATGGGGAGAGACATGTAATTTTCGACATGACACAGATGCAAGGGAGCACTGTCTGAGAGGTGTTTGTTTTGATTTTCTGAACAAGGGAAAATGTGAAAGGGGCCCAGACTGCCGCTTTAGACACAGCTTGCAGGATGAAGGTGATAAGTTTCCTTCTAGGAAGCCTGGATCAGAAAATACAAGGTCTAGCAGATCAAGAGACTGTTGGTTTTGCCTGTCAAGTCCCAGTGTGGAGTCGCATTTAATCATAAGCATTGGGGAAAATTCTTATCTAGCATTGGCTAAAGGACCACTCGTTGAAGACCATGTGCTTATAGTACCAGTTGAGCACATGCCAAATACCTTATCTCTTTCTTCTGAATCTGACGTTGAGCTCTTAAAGTTGCAGAACAGTCTCAAGAGATATTGCAAGAACCAAGAAAAGGAAGTCATTTTTTTTGAGTGGGCTTCCATACGTGGAACTCATGCCAATCTTCAGGCCATTCCCATTCCATTTTCCAAAGCAGTTATGGTTGAAAAAGCATTCAATTTAGCTGCAGAGAAGTTGGGATTTAAATTTGAGGAAAAGAAATTCGACAGCATTTCTGATGGAAGAAAGTTTTTGAAGACCCAAATTGATGGGAATTCAAGCTTGTTCTATGCTGAAATCCCAGGAGGCACAATTCTGCTGCACCATGTTGAGGAGAAAGACACTTTTCCCGCCCAATTTGGACGCGAGGTTCTGGCAGGGTTGCTTAATATGGCAGATAACGCCAATTGGAGGAATCACAAACATAACAAAGATGAAGAGATGAAAATCGTTGAAGATTTCAAGGACCGATTTGAAGAATATGATCCAAACCGTTGA 1818 0.4439 MAPRILLCGDVNGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPDLLDDFTAYIEGGGSHIPLPTYFIGDYGVAAPKFLLAASKDSVNCGFKMDGLRVCDNLFWLKGSGKFNLFGLSVTYLSGRKSSTGQQFGTYSEDDADALRAIAEESGVVDLFLTNEWPSGVTNGVAASDIPAGFSDSTGSDSTISELVQEIKPRYHIAGSKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTFAGGKASPKDTVKRSSDGISDSQHWRYDVPQKRQKHEAGDKLCFKFVSSGSCQWGETCNFRHDTDAREHCLRGVCFDFLNKGKCERGPDCRFRHSLQDEGDKFPSRKPGSENTRSSRSRDCWFCLSSPSVESHLIISIGENSYLALAKGPLVEDHVLIVPVEHMPNTLSLSSESDVELLKLQNSLKRYCKNQEKEVIFFEWASIRGTHANLQAIPIPFSKAVMVEKAFNLAAEKLGFKFEEKKFDSISDGRKFLKTQIDGNSSLFYAEIPGGTILLHHVEEKDTFPAQFGREVLAGLLNMADNANWRNHKHNKDEEMKIVEDFKDRFEEYDPNR* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4666 605 MobiDBLite consensus disorder prediction 271 303 - -
Mtr4g4666 605 SUPERFAMILY HIT-like 388 463 IPR036265 -
Mtr4g4666 605 SUPERFAMILY CCCH zinc finger 311 337 IPR036855 GO:0046872
Mtr4g4666 605 Gene3D - 298 367 - -
Mtr4g4666 605 Pfam Protein similar to CwfJ C-terminus 1 385 499 IPR006768 -
Mtr4g4666 605 MobiDBLite consensus disorder prediction 281 303 - -
Mtr4g4666 605 ProSiteProfiles Zinc finger C3H1-type profile. 345 368 IPR000571 GO:0046872
Mtr4g4666 605 Pfam Protein similar to CwfJ C-terminus 2 513 602 IPR006767 -
Mtr4g4666 605 ProSiteProfiles Zinc finger C3H1-type profile. 308 336 IPR000571 GO:0046872
Mtr4g4666 605 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 1 604 IPR040194 -
Mtr4g4666 605 PANTHER CWF19-LIKE PROTEIN 1 1 604 - -
Mtr4g4666 605 Gene3D - 368 497 IPR036265 -
Mtr4g4666 605 CDD MPP_CWF19_N 6 233 - -
Mtr4g4666 605 SMART c3hfinal6 342 367 IPR000571 GO:0046872
Mtr4g4666 605 SMART c3hfinal6 310 335 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr4g4666 CwfJ_C_1 1.9e-34 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4666 K24939 - gmx:100782106 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4666 4 60646709 60652015 Mtr4g4666 4 60646709 60652015 ECH