Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4655 ATGGATACAGAGTGCATAGAAATTACAAACCTAGAAGATGGGAGAACTAATCATATGTCCAATGGTTTAGAAACCCCTTCAAAAGTTATTTCATCTCATGAGACTAATGATGGTGATCATCCTAATCTTCATCCTCGTATTGGAATGGAATTCAACAACATTAATGATGTTAAGGAATTCTACATATCATTTGCTAAGAAAGAAGGTTTTGGAATTCGAACTCGTACAACCAAGGAAAATTTTTGTACACTTGTATGTTCTAATGAAGGTAAACATACAACAAAGAGTAGCAATGAAGACGAATACAATGTTTCCATGGGAACTAAGAAAAAGACCTCAACTTCTAGAACTGATTGCAAGGCATTACTTAGTGTTTCAAAAGCATGGAAGAGGAGCAAATGGAGTATCATAAGCTTCAGTAATGATCATAATCATGCCATGCTTAGCCCTAAGAGTGTGAATTATCTTAGGTGTCATAAGAAAATGGGTATGCCAGCTAGGAGTCTTGTTGAGAAGTTTGATGAGGAGGGAATACCTACAGGAAAGGTTGCTAAAATGTTCAATAGTGGAGATGAGACAGAGAAGTCTTTTGAATGGTTATTTCTAACATGGCTAAAGGCAATGAGTGGAAAAAGTCCTGTGTCGATAATAACGGATCAAGATTTGGCAATGAAAACTGCAATTGCCAATGTGTTTCCAAATACTCGTCACCGATTATGCTTGTGGCACATCCGCAGAAAATTTGCCGAAAAGCTTTCACATATATACCATAAAAAATCACCTTTCAAGAAGGAATTGAAATCGTGCATTCGTGAGTCACCATCCATTGAAGATTTTGAAGAGAATTGGGAGCGTATTTTAGTCGCCTATGATTTGAAGGCGAATCAATGGCTTCAAGGTTTGTATAAAATAAGAGAGTCATGGGTACCTATTTATAACAGAAGTACTTTTTTTGCTGGGATGAACACTACACAAAGAAGTGAGAGCATTAATGCTTTTTTTGATTCATTTGTTAATTCGTCAACTATACTACAAGATTTTGTAGTGAAATTTGAAAAGGCAGTGGATAGCCGGTATGAAAAACAGAAACGAGAAGATTTTGAATCAAGGCACCGATCACGTCTCTCTGGTATTAAGTCAAAAATTGAGGAGCATGCAGCATCGATTTATACAAGAACCATGTTTGGAAAGTTTCATGATGAGCTCGCACAGATTCTTCAATTCAAAAAGGAGAAAATTGAAAAAAATGGATCTCAATATACATACAAAGTATCCAGCTGTTATGACTCTCGAGACACATTCATTGTCCATGTGGATCTTGAGACAAAGGTTGCAAAGTGTTGTTGTCAACTTTTTGAGTTTATGGGAATATTATGCAGACATATCTTGGTGATTTTCCAAGCCAAAAATGTTGTCAACATTCCAAGTAATTATATTTTAAAGCGTTGGACAAAAGATGCTATCAAGGGTTCTGAATTTGATGAAAATGGGGGGAAAAATTCGATTGAGAACAACAGTTCAGCAACTCTACGAAGTATACATGTACATACTCAAGCCAACCTATTATCTGATCTTGCAGCAAAATCACCTATTTTACACGAAATGATATCAGATGGAATGAAGCAACTGTATGACAGAGCTTTAGCACGAAAAAATGAACTGCGCATTGAAGATGGCATAACTCCTTTAGAGCCAAGTTCTGAAAATTTGACGAGTGAGCCATTGAACGTATCTGTTGAATTAGATATTAAAGATCCACGTGGTTCACAAACTAAAGGAAGAAAAAAGGATGTGACAAGAGAGACTCAACATGGAAGAATAAAAAGTAGTATTGAATTATCAATAAATCGATCACAAGCCAAGAGAAGAAGTTGCCAATTATGTGGAGAGCATGGCCACAATCGGCGAGGCGAAGTTGCAAACAAAAGACAAGTGACGATTCTATTGATTGATGGAGATGGTTTGGTGTTGACATCTGAAGTGATGTCTTAA 1992 0.365 MDTECIEITNLEDGRTNHMSNGLETPSKVISSHETNDGDHPNLHPRIGMEFNNINDVKEFYISFAKKEGFGIRTRTTKENFCTLVCSNEGKHTTKSSNEDEYNVSMGTKKKTSTSRTDCKALLSVSKAWKRSKWSIISFSNDHNHAMLSPKSVNYLRCHKKMGMPARSLVEKFDEEGIPTGKVAKMFNSGDETEKSFEWLFLTWLKAMSGKSPVSIITDQDLAMKTAIANVFPNTRHRLCLWHIRRKFAEKLSHIYHKKSPFKKELKSCIRESPSIEDFEENWERILVAYDLKANQWLQGLYKIRESWVPIYNRSTFFAGMNTTQRSESINAFFDSFVNSSTILQDFVVKFEKAVDSRYEKQKREDFESRHRSRLSGIKSKIEEHAASIYTRTMFGKFHDELAQILQFKKEKIEKNGSQYTYKVSSCYDSRDTFIVHVDLETKVAKCCCQLFEFMGILCRHILVIFQAKNVVNIPSNYILKRWTKDAIKGSEFDENGGKNSIENNSSATLRSIHVHTQANLLSDLAAKSPILHEMISDGMKQLYDRALARKNELRIEDGITPLEPSSENLTSEPLNVSVELDIKDPRGSQTKGRKKDVTRETQHGRIKSSIELSINRSQAKRRSCQLCGEHGHNRRGEVANKRQVTILLIDGDGLVLTSEVMS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4655 663 MobiDBLite consensus disorder prediction 91 110 - -
Mtr4g4655 663 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Mtr4g4655 663 MobiDBLite consensus disorder prediction 583 605 - -
Mtr4g4655 663 Pfam SWIM zinc finger 437 470 IPR007527 GO:0008270
Mtr4g4655 663 SMART 26again6 445 472 IPR006564 GO:0008270
Mtr4g4655 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 191 538 - -
Mtr4g4655 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 27 174 - -
Mtr4g4655 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 191 538 IPR031052 GO:0006355
Mtr4g4655 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 174 IPR031052 GO:0006355
Mtr4g4655 663 Pfam MULE transposase domain 191 246 IPR018289 -
Mtr4g4655 663 MobiDBLite consensus disorder prediction 585 605 - -
Mtr4g4655 663 ProSiteProfiles Zinc finger SWIM-type profile. 434 470 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4655 Mtr-Chr4 60525062 60527502 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g4655 FAR1 3.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4655 - - qlo:115970754 514.998