Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4654 ATGGCGGTAGCACACGGTGGTTACGACGGTGAAATCGGTGGCTACAATTCTCGTCTAATCCCATCAATAAAACCAGAGTTATTCAATGACAGTGCAAATTCCAGCTCTTACACCTACGACGACGTTTCAACCGAAAGAAAAGAATCAGTACTAACCGAAGAAGAAGAAGAAGGTGCTACAGCTTCTCACGCAATTCATATCAAAGAAGAAGTTCTTGAAGAAGACGACGGTGCTGCTCACGCTTCATCTTCACTCAGGTTTCCAAAACCAATGGAAGGGCTACATGAGGTTGGTCCACCACCGTTTCTCAAGAAGACTTTTGAAATGGTGGAGGATCTGGAAACTGACCCGATTGTTTCATGGAGTGCTTCTCGTGATAGTTTTGTTGTTTGGGATTCTCATGAATTCTCCAAAATTCTTCTTCCTAAGTACTTTAAGCATAATAATTTTTCTAGCTTCATTCGCCAGCTCAACACCTATGGGTTTAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGATTTCAAGCAGGGAAAAAGCATTTGTTGAAGAACATAAGAAGGAGAAGCAAGTATAACAAACTGCATCAAGGAGGATTCAATTTGATGAATCCTTGCGTTGAATCTGAAGTGGAGAAACTGAAAAAAGATCAGAACATGTTGAAATTGGAAATTCTGAAGCTAAGGCAACAACAAGAGAATTCAAATATTCAACTCACAAATGTTCAGGAGCGAGTTCGGCGTGCGGAATCAAAGCAATATCAGATGCTATTTTTCCTCACCAAAATGGCCAAAAGGCCATTGTTTATGGAGCAGATAATCCAAAAGATAAAGCGAAAAGGAGAAGTTGATGGTAATATAGACATGGTTAAAAGACCTAGATTGCTTGGAACACAAGGTACTAGTGTTGATTATAGGTGTCAGGGTCGTGAACAATTTGCTACTTTGCAATCTGAATTGAATGGACTTTTTCCTGAAAATATGAACACTGGTAGAATGGAACCACCTGTTTCCACTCCCATGGAAGATGGGCTGGGTAGCTCTTTACATGACTTGAGGGCTTGTGGTGGTTCTAGACAAAGTGTTCAAGATGCGAATTCTGCATATCATGTTATGTCAGAGAAGCTTTTGGGGGAAAATTCGGTTGTTGATGAAGAAATGGATGTGAATGACTCTAATATCTATCTTGAACTAGAGGATTTGATAAGTAAGCCAACAGATTGGGGTGGAACTGCTAGTGGATTAGTGGGACAAACTAGTTGA 1269 0.4058 MAVAHGGYDGEIGGYNSRLIPSIKPELFNDSANSSSYTYDDVSTERKESVLTEEEEEGATASHAIHIKEEVLEEDDGAAHASSSLRFPKPMEGLHEVGPPPFLKKTFEMVEDLETDPIVSWSASRDSFVVWDSHEFSKILLPKYFKHNNFSSFIRQLNTYGFRKVDSDRWEFANEGFQAGKKHLLKNIRRRSKYNKLHQGGFNLMNPCVESEVEKLKKDQNMLKLEILKLRQQQENSNIQLTNVQERVRRAESKQYQMLFFLTKMAKRPLFMEQIIQKIKRKGEVDGNIDMVKRPRLLGTQGTSVDYRCQGREQFATLQSELNGLFPENMNTGRMEPPVSTPMEDGLGSSLHDLRACGGSRQSVQDANSAYHVMSEKLLGENSVVDEEMDVNDSNIYLELEDLISKPTDWGGTASGLVGQTS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4654 422 ProSitePatterns HSF-type DNA-binding domain signature. 141 165 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g4654 422 PRINTS Heat shock factor (HSF) domain signature 102 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g4654 422 PRINTS Heat shock factor (HSF) domain signature 140 152 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g4654 422 PRINTS Heat shock factor (HSF) domain signature 153 165 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g4654 422 MobiDBLite consensus disorder prediction 41 65 - -
Mtr4g4654 422 SUPERFAMILY "Winged helix" DNA-binding domain 98 191 IPR036390 -
Mtr4g4654 422 MobiDBLite consensus disorder prediction 29 65 - -
Mtr4g4654 422 SMART hsfneu3 98 191 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g4654 422 Coils Coil 213 254 - -
Mtr4g4654 422 Gene3D - 95 192 IPR036388 -
Mtr4g4654 422 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 76 411 IPR027725 -
Mtr4g4654 422 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 76 411 - -
Mtr4g4654 422 Pfam HSF-type DNA-binding 102 191 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4654 Mtr-Chr4 60516653 60519608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4654 88 300 HSF AT2G26150 54.054 1.36e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mtr4g4654 HSF_DNA-bind 8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4654 K09419 - gmx:100818430 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4654 4 60516653 60519608 Mtr4g4654 4 60516653 60519608 ECH