Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4652 ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTTGGTAGGAAGATCGGTAGCGGTTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGCTGCTGTACGAATCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTAGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGTTATCACTAAAAACAGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTATGTCGGGGTTATCCAACCGAATTTGCATCATACTTCCATTACTGTCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTCCGCGACCTGTTTATCCGTGAAGGATTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCCACACCTCCAGCACGGGGCATTGTTCCTGGTGCTGGAACCAGTTCTGCATTGCCACCTGCTGTTACCAATGCTGATAGACATACAGGAGCAGAAGGGCAACCCCCTGGTTTGGTTTCGGTGGATTCCTCGAGGCGCAGAATGTCGGGACCCATTTTGAATACTTTATCAAGTTCCAATGTCTTGGGTCAATCAAGTGGATCATCTAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTACACGCACCGCTGAGGCTAGCCCTGGAGCAGCAGCACATAGAATTTTGAGCGGTCAAAGAAGTTCACTAATCGGATCTTCTGATCCCCAGAGAGTAGCACGGGCTGGAAGAAATGCTTCTCAAGGCAATAACTATGAAAGTGCCCTTAGGGGCATGGACGGTTTGCAGTTAGAAAATGATGAGAGAACCCATTATTAA 1365 0.4256 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIVPGAGTSSALPPAVTNADRHTGAEGQPPGLVSVDSSRRRMSGPILNTLSSSNVLGQSSGSSRRVAVSSSRDAFVGAESDVRTRTAEASPGAAAHRILSGQRSSLIGSSDPQRVARAGRNASQGNNYESALRGMDGLQLENDERTHY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4652 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4652 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr4g4652 454 MobiDBLite consensus disorder prediction 347 375 - -
Mtr4g4652 454 MobiDBLite consensus disorder prediction 408 436 - -
Mtr4g4652 454 PANTHER CASEIN KINASE I-LIKE 1 432 - -
Mtr4g4652 454 PANTHER CASEIN KINASE-RELATED 1 432 - -
Mtr4g4652 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mtr4g4652 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4652 454 MobiDBLite consensus disorder prediction 311 454 - -
Mtr4g4652 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4652 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr4g4652 454 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Mtr4g4652 454 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4652 Mtr-Chr4 60490711 60498477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4652 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.15e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr4g4652 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4652 K02218 - gmx:100785851 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4652 4 60490711 60498477 Mtr4g4652 4 60490711 60498477 ECH
Mtr4g4652 4 60490711 60498477 Mtr2g1570 2 17539221 17548096 PCT