Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4651 ATGGTTGATGCCATACTTGGTGTTGTGTTCCACAATTTAACATCTCTACTTCAAAATGAATTTTCCACCGTATCTTCAATCAAGTCAAAAGCTGAAAACCTGTCAAACACGTTAGATCTCATCAAGGCAGTTCTTGAAGATGCTGAGCAGAAACAAGTCACAGACCGCTCTATTAAAGTATGGCTTCAGCAACTCAAAGATGCTGTTTACGTTCTCGATGATATCCTTGATGAATGTTCGATCAAATCTAGTCGACTTATGGGTTTATCGTCATTCAAACCAAAAAATATTGTGTTTCGTCATGATATTGGAAACAGATTGAAAGAAATTACAAGGAGATTCGATCAAGAAAGCTCAACTGAAATAGCTGAATGGCGCCAAACCAGCTCCATTTTTACTGAACCGAAAATCTTTGGACGGAAAGAAGATAAAGAGAAGATTGCCGAGTTTCTTCTCACCCAAGCGAGTAAGTTTGACTTCCTTGTTGTGTATCCTATTGTTGGTTTAGGTGGTGTTGGTAAAACAACTCTTGTTCAATTGGTCTACAATGATGTTAGAGTGAGTAAAAAATTTCATAGAAAAATTTGGGTTTGTGTTTCTGAGGATTTCTCTGTCAATAGGATTTTGTGTTCCATTATAGAATCTATTACAAGAGAAAAGTGTGATGGCTTAGATTTAGATGTGATACAAAGAAGAGCGCAAGAATTGTTGCAAGGTAAAAGATATTTGTTGGTTTTGGATGATGTGTGGAATAGAAATCTAGAATTCAAACTAGGATTAAGCCAAGAAAAATGGAACAAGTTGAAATCTGTGTTGTCCTGTGGATCCAAAGGTGCTTACATTTTAGTTTCCACTTGTGATAAGGATGTTGCGACAATCATGGGAACATGTCAAACTCATCATTTATCTGGCCTCTCAGAGAAGGAATGTTGGCTGTTATTCAAACAATATGCATTTGAACATGATATAGAAGAACGAGAAGAGCTAGTGGCAATAGGCAAAGCGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCTGCACAAGCATTAGGAGGTCTAATGCGCTCAAGAAATGGAGAAAAGGAATGGGTTGAAATTAAAGAGAGCAAGCTTTGGTCTTTATCAGATGAGAATTCTATTTTGCCTGCCTTGAGGTTGAGTTATTTCCATTTAACGTCAACCTTAAAACAATGTTTCTCTTTCTGTGCCATATTTCCCAAAGATACGGAAATCCTAAAAGACGATTTGATTCATCTCTGGATGGCCAATGGATTTATTTCGTCTAAGGAAAATTTGGAGGTAGAAAGAAGTTGGCAATATGATTTGGAATGA 1332 0.3716 MVDAILGVVFHNLTSLLQNEFSTVSSIKSKAENLSNTLDLIKAVLEDAEQKQVTDRSIKVWLQQLKDAVYVLDDILDECSIKSSRLMGLSSFKPKNIVFRHDIGNRLKEITRRFDQESSTEIAEWRQTSSIFTEPKIFGRKEDKEKIAEFLLTQASKFDFLVVYPIVGLGGVGKTTLVQLVYNDVRVSKKFHRKIWVCVSEDFSVNRILCSIIESITREKCDGLDLDVIQRRAQELLQGKRYLLVLDDVWNRNLEFKLGLSQEKWNKLKSVLSCGSKGAYILVSTCDKDVATIMGTCQTHHLSGLSEKECWLLFKQYAFEHDIEEREELVAIGKAIVKKCGGLPLAAQALGGLMRSRNGEKEWVEIKESKLWSLSDENSILPALRLSYFHLTSTLKQCFSFCAIFPKDTEILKDDLIHLWMANGFISSKENLEVERSWQYDLE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4651 443 CDD RX-CC_like 12 119 IPR038005 -
Mtr4g4651 443 PANTHER OS08G0543100 PROTEIN 24 435 - -
Mtr4g4651 443 Coils Coil 31 51 - -
Mtr4g4651 443 Gene3D - 118 300 IPR027417 -
Mtr4g4651 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 402 IPR027417 -
Mtr4g4651 443 PRINTS Disease resistance protein signature 163 178 - -
Mtr4g4651 443 PRINTS Disease resistance protein signature 236 250 - -
Mtr4g4651 443 PRINTS Disease resistance protein signature 340 354 - -
Mtr4g4651 443 Pfam Rx N-terminal domain 6 99 IPR041118 -
Mtr4g4651 443 Pfam NB-ARC domain 141 387 IPR002182 GO:0043531
Mtr4g4651 443 Gene3D - 304 392 IPR042197 -
Mtr4g4651 443 Gene3D - 6 116 - -
Mtr4g4651 443 PANTHER DISEASE RESISTANCE PROTEIN RP 24 435 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4651 Mtr-Chr4 60484546 60489512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4651 168 427 WRKY Transcription Factor Family AT5G45050 25.746 4.96e-08 53.5