Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4639 ATGGAAGAAATATCTTCAAGTGTTGCAGTGCCATTTACACTTGGAAATTTGATTCAAAAGGATGCTGCAGTTACAACTCATATGGAGATAACCGGGTTGAAGCTTATGGCAAATACAGCTGCAGCTTTGATATTAAATCCTACAGTTGGTAATGAAAACCATGCTGATGTTAGTTTGCAACATCAGATCACGGTATCCGCGGAGGTAAAGGAGAATCAAGTTGGTGCGTCCGTTCTCTCAGAAATGTTGATTGAATGTGAGAGTAATTGGATCTTGAGTGAAAGTCATAACCAGGCTATAAAGGATGATGAGATCATGTTAGCTGTGGATTTTCAGTGCCTGCATAATTCAGGCTCTCAATCTGTGGCAGATTCACCAATAATCGTCACGGTTGGTGATGAGATTCATGGTAAGTTTAGCATAAACGAGGTACTTCCGGCACTGAAGGCAGAGCAGAATACGGTTTCTATTGCAATGGATATTGAGAGAGAAAATCGAAGCGTGTCAGAAGAGGCTGATCCAAAACTATCTGCTATACTTCTTGATCAGTTGCCAAAGGAGAACAAATCATTGAGAACAAGCAACCAGAATGGTTTGGAATTGAGTAGTGGCCCTCTATGGGGTTCCTCATCAATCTGTGGAAATAGACCGGAGATGGAAGATGCTATTGCTGTCAAACCTCAGTTTTTTCAAGTCCCTTCACAGATGCTAATGGATGACCATTTGAATGAAAACACAAAATACCCACAAGCCCATTTTTTTGGTGTCTATGATGGGCATGGAGGCTTTCAGGTTGCTAATTACTGTCAAGAACGTCTACACTCAGCGTTGATTGAGGAGATTGAAGCTCGACAGTCAAGTTTGGATGAAACAAATGGGAGAAACAATTGGCAGGAAAATTGGAATAAAGTATTGTTCAATTGTTTTCAGAAAGTAGATGATGAGATTGAAACTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAATCAAACCCACATAATTGTTGCAAATTGTGGGGATTCGAGAGCTGTCTTGTATCGTGGGAAAGAAGCCATTGCGTTGTCTTCTGACCACAAACCGAATCGAGAGGATGAGAGGGCAAGAATCGAAGCAGCAGGAGGAAGAGTCATACATTGGAAAGGATACAGAGTTCTTGGTGTCTTGGCCATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATGGTGCAAAGAGAGAAAAATGATGAGTGCCTTATTTTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGTGATATTGCAAGAAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGAGCAACAGTACTTGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCCGCAGAGTATCTATCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA 1542 0.4157 MEEISSSVAVPFTLGNLIQKDAAVTTHMEITGLKLMANTAAALILNPTVGNENHADVSLQHQITVSAEVKENQVGASVLSEMLIECESNWILSESHNQAIKDDEIMLAVDFQCLHNSGSQSVADSPIIVTVGDEIHGKFSINEVLPALKAEQNTVSIAMDIERENRSVSEEADPKLSAILLDQLPKENKSLRTSNQNGLELSSGPLWGSSSICGNRPEMEDAIAVKPQFFQVPSQMLMDDHLNENTKYPQAHFFGVYDGHGGFQVANYCQERLHSALIEEIEARQSSLDETNGRNNWQENWNKVLFNCFQKVDDEIETLAPETAGSTAVVAILNQTHIIVANCGDSRAVLYRGKEAIALSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNMVQREKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKYGDNGATVLDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4639 513 Pfam Protein phosphatase 2C 231 496 IPR001932 -
Mtr4g4639 513 ProSitePatterns PPM-type phosphatase domain signature. 253 261 IPR000222 GO:0043169
Mtr4g4639 513 ProSiteProfiles PPM-type phosphatase domain profile. 206 503 IPR001932 -
Mtr4g4639 513 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 106 513 - -
Mtr4g4639 513 Gene3D - 195 513 IPR036457 -
Mtr4g4639 513 CDD PP2Cc 208 503 IPR001932 -
Mtr4g4639 513 PANTHER ALPHABET, ISOFORM E-RELATED 106 513 - -
Mtr4g4639 513 SUPERFAMILY PP2C-like 206 504 IPR036457 -
Mtr4g4639 513 SMART PP2C_SIG_2 237 503 IPR001932 -
Mtr4g4639 513 SMART PP2C_4 196 501 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4639 Mtr-Chr4 60353544 60356915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4639 192 512 PP2C-type Phosphatase Gene Family AT4G26080 61.728 6.76e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4639 K14497 - gmx:100789207 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4639 4 60353544 60356915 Mtr4g4639 4 60353544 60356915 ECH
Mtr4g4639 4 60353544 60356915 Mtr2g1586 2 17806355 17809664 PCT