Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4603 ATGAAAATCACGTGGAAATCAATATTTTCAAGCTGTTATCAGGGTGAAGGTGAGTACACTTCACCTAAAGCAACAACAAAAGAAACATCAACAAAAGTTGTTGCTACAAAGACAAGTTCTTTTAACAGAATATCTCTCACGGATCTGAGTTTTCCAAGTGCCACAACACTTTCAGAAGATCTTTCAATTTCTCTAGCAGGGTCTAATCTCTATGTTTTTACACTAGCTGAGCTCAAGATCATTACTCAGGGTTTCTCTTCTAGTAATTTTCTTGGTGAAGGAGGATTTGGACCTGTTCATAAAGGTTTCATTGATGATAAGGTTAGAGCTGGACTTGAACCTCAACCTGTGGCTGTTAAGCTCTTAGATTTGGATGGTACTCAAGGTCATAGAGAATGGCTGACTGAGGTTGTGTTTCTTGGTCAACTAAGACATCAACACCTTGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACATAGACTTTTGGTATATGAGTATTTACCAAGAGGAAGCTTAGAGAATCAATTATTTAAAAGATATTCAACATCGTTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTCTAGCTTTTTTACATGATGCAAAGAAACCAGTCATCTACAGAGATTTCAAAGGTTCAAATATCTTATTAGACTCCGACTATAATGCAAAACTCTCTGATTTTGGCTTGGCAAAAGATGGTCCTGAAGGAGATGACACACATGTTTCAACTAGAGTTATGGGCACTCAAGGTTATGCTGCACCTGAATATATCATGACAGGACATTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTTGTTCTCTTGGAGCTATTAACCGGTAGAAGGTCAGTCGACAAGGTACGTCCACCAAGAGAACAGAATCTAGTGGAATGGGCTAGACCAGTGTTAAACGATGCTCGTAAACTTTCCAGAATAATGGATCCAAGGCTTGAAGGACAGTATTCTGAGATGGGAGCAAGAAAAGCAGCTGCATTGGCTTATCAATGTTTAAGCCATAGACCAAGAAATAGACCTACAATGTCTACGGTGGTTAACACTCTTGAACCTCTCAAGGATTTTGATGACATTCCAATAGGTCCTTTTGTTTACACAGTTCCAACTGATGTTAGTAATAATGAGGTGCAAAAAGAAAGTGCTACTATTGAAACACCAAAGGAGAGAAAAAGGGAAAGTAGTAGTAGTAGTACTAGTACTCATCATCATCATCGTAGAAATCAAGATGTCAATAATAGCCCTAAGCCAAAGCATCTTATTATTGATAATAACAATAATGAAGTACTAGTACATAAAAAAGATGGAGAAGAATATTATGATACACCTAAGGAGAAGAAAAGGGAAAATGGTCATCGTCATAGAAGTCATCATCATCATCATCGCCACAATGGCCATAAACATCCACTTAAATCACCAAAAACAAAATCATCAAATGAGGGACAACAAAGTGGGTCACACTCATCACCAGATACCTCCTCTATTACATCAGAAAGCCAAGGAAATTAA 1545 0.378 MKITWKSIFSSCYQGEGEYTSPKATTKETSTKVVATKTSSFNRISLTDLSFPSATTLSEDLSISLAGSNLYVFTLAELKIITQGFSSSNFLGEGGFGPVHKGFIDDKVRAGLEPQPVAVKLLDLDGTQGHREWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFKRYSTSLPWSTRMKIAVGAAKGLAFLHDAKKPVIYRDFKGSNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKVRPPREQNLVEWARPVLNDARKLSRIMDPRLEGQYSEMGARKAAALAYQCLSHRPRNRPTMSTVVNTLEPLKDFDDIPIGPFVYTVPTDVSNNEVQKESATIETPKERKRESSSSSTSTHHHHRRNQDVNNSPKPKHLIIDNNNNEVLVHKKDGEEYYDTPKEKKRENGHRHRSHHHHHRHNGHKHPLKSPKTKSSNEGQQSGSHSSPDTSSITSESQGN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4603 514 MobiDBLite consensus disorder prediction 387 514 - -
Mtr4g4603 514 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 30 419 - -
Mtr4g4603 514 Gene3D Phosphorylase Kinase; domain 1 24 167 - -
Mtr4g4603 514 MobiDBLite consensus disorder prediction 487 514 - -
Mtr4g4603 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Mtr4g4603 514 MobiDBLite consensus disorder prediction 461 484 - -
Mtr4g4603 514 PANTHER OS01G0588500 PROTEIN-RELATED 30 419 - -
Mtr4g4603 514 ProSiteProfiles Protein kinase domain profile. 85 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4603 514 MobiDBLite consensus disorder prediction 394 425 - -
Mtr4g4603 514 Pfam Protein tyrosine and serine/threonine kinase 89 362 IPR001245 GO:0004672|GO:0006468
Mtr4g4603 514 MobiDBLite consensus disorder prediction 440 460 - -
Mtr4g4603 514 Gene3D Transferase(Phosphotransferase) domain 1 168 371 - -
Mtr4g4603 514 CDD STKc_IRAK 91 365 - -
Mtr4g4603 514 SUPERFAMILY Protein kinase-like (PK-like) 61 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4603 Mtr-Chr4 60063174 60065951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4603 73 418 Glycoside Hydrolase AT3G07070 48.424 2.13e-103 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr4g4603 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4603 - - mtr:MTR_4g125260 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4603 4 60063174 60065951 Mtr4g4603 4 60063174 60065951 ECH
Mtr4g4603 4 60063174 60065951 Mtr2g1636 2 18426731 18430318 PCT