Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4592 ATGGCCGCTGTTCGTTTTATTCTCATTTTCTTTCTTCTCATCTCTCTCCCTTTTCATTCCTCTTCCATTTCTGAAGCTGAAGCTCTTCTCAAACTCAAACAATCCTTCACAAACACGCAATCTCTTGCATCATGGCTTCCTAATCAAAATCCATGTTCTTCAAGATGGGTTGGTGTCATTTGTTTCGACAATGTCATCTCAAGTCTTCATCTTACCGATTTAGGCCTCTCTGGAAAAATTGACATTGATTCTCTTTTACAAATTCCAACGTTAAGAACCATTAGTTTTGTTAACAACTCTTTCTCTGGTGCAATTCCTGAATTCAACAAACTTGGTGCTCTTAAAGCTCTTTATTTATCATTAAACCAATTCTCAGGACCTATTCCTCCAGATTTTTTTTCTCATTTAGGTTCTCTCAAGAAAGTATGGCTCAACAATAATAAATTCTCAGGAAATATACCAGACTCATTAACAAATCTTCGTTTCCTCGGTGAGTTACATCTCGATAACAATGAGTTCTCTGGTCCTATTCCAGAATTCAAACAAGATATTAAATCTTTAGACATGTCTAACAACAAGTTACAAGGTGCAATACCTGGTCCCTTGTCCAAGTATGAGGCAAAATCTTTTGCAGGAAATGAAGAGCTTTGTGGGAAGCCACTTGACAAAGCATGCGATCCTTCTTCGGATTTAACGTCACCACCTAGCGATGGATCCGGACAAGATAGTGGTGGTGGTGGTGGTGGTACTGGTTGGGCTTTAAAGTTTATTGGAATTCTTTTGGTTGCTGCCTTATTTGTTGTGTTTGTCACGTTTATTAAATCGAAACGTAGAAAGGACGATGATTTCAGTGTTATGAGTAGAGAAAACAATGAAGATATCATTCCAGTTCATGTTCCTATCTCAAAACATAGCTCATCAAAACATAGCAGAGCATCAGAAAGTAGTGGAAAGAAGGATTCTAGGAGAGGTTCTTCGAAGAGTGGTGGAATGGGTGATCTTGTAATGGTGAATGATGAAAAAGGTGTGTTTGGTCTACCTGATTTGATGAAAGCTGCTGCTGAGGTTTTGGGAAATGGTGGATTAGGTTCTGCTTATAAAGCAGCCATGACTAATGGTTTATCTGTGGTTGTGAAGAGGATGAGGGAGATGAATAAAGTAAGCAGAGATATATTTGATGCCGAGATGAGACGGTTTGGGAGGCTTAGAAACCGTAATATTTTGGCTCCTTTGGCTTACCATTACCGCAGGGAGGAGAAGTTATTTGTTACTGAATACATGCCTAAAGGAAGCTTGTTATATGTCTTGCATGGTGATAGAGGAACAAGTCATGCTGAACTAAATTGGCCAACACGTTTAAAGATAGTGAAAGGAATTGCACGTGGATTGACATTTCTTTATACTGAATTTGAATCCGAAGACCTGCCACATGGAAACCTCAAATCAAGCAATATACTTCTAGCCGATAATTATGAGCCACTCTTAAGTGACTTTGCATTTCATCCATTAATCAACTCAAGTCATGCAACACAAACAATGTTTGCATACAAAACTCCTGATTACGTTCTTTACCAACATGTTTCACAGAAAACCGATGTTTATTGTCTCGGAATCATCATTCTTGAAATCATTACAGGAAAATTCCCTTCTCAATATCACAGTAATGGTAAAGGTGGTACTGATGTTGTTCAATGGGTGTTCACAGCAATTTCTGAGAGAAGAGAAGCTGAATTGATTGATCCAGAGTTAACAGCAAACAATCAAGATTCAATTAATCATATGTTGCAACTTCTTCAAATTGGGGCTGCTTGCACAGAAAGTAACCCTGAACAACGACTTAACATGAAGGAAGCAATTAGGAGGATAGAGGAATTACAAGTTTAA 1884 0.3827 MAAVRFILIFFLLISLPFHSSSISEAEALLKLKQSFTNTQSLASWLPNQNPCSSRWVGVICFDNVISSLHLTDLGLSGKIDIDSLLQIPTLRTISFVNNSFSGAIPEFNKLGALKALYLSLNQFSGPIPPDFFSHLGSLKKVWLNNNKFSGNIPDSLTNLRFLGELHLDNNEFSGPIPEFKQDIKSLDMSNNKLQGAIPGPLSKYEAKSFAGNEELCGKPLDKACDPSSDLTSPPSDGSGQDSGGGGGGTGWALKFIGILLVAALFVVFVTFIKSKRRKDDDFSVMSRENNEDIIPVHVPISKHSSSKHSRASESSGKKDSRRGSSKSGGMGDLVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMTNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNRNILAPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTSHAELNWPTRLKIVKGIARGLTFLYTEFESEDLPHGNLKSSNILLADNYEPLLSDFAFHPLINSSHATQTMFAYKTPDYVLYQHVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERREAELIDPELTANNQDSINHMLQLLQIGAACTESNPEQRLNMKEAIRRIEELQV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4592 627 MobiDBLite consensus disorder prediction 222 246 - -
Mtr4g4592 627 MobiDBLite consensus disorder prediction 294 333 - -
Mtr4g4592 627 Gene3D Phosphorylase Kinase; domain 1 350 426 - -
Mtr4g4592 627 SUPERFAMILY Protein kinase-like (PK-like) 355 622 IPR011009 -
Mtr4g4592 627 MobiDBLite consensus disorder prediction 307 326 - -
Mtr4g4592 627 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4592 627 Gene3D Transferase(Phosphotransferase) domain 1 427 627 - -
Mtr4g4592 627 Gene3D Ribonuclease Inhibitor 134 226 IPR032675 -
Mtr4g4592 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 627 - -
Mtr4g4592 627 PANTHER LRR RECEPTOR-LIKE KINASE 4 627 - -
Mtr4g4592 627 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Mtr4g4592 627 SUPERFAMILY L domain-like 22 204 - -
Mtr4g4592 627 Gene3D Ribonuclease Inhibitor 24 133 IPR032675 -
Mtr4g4592 627 ProSiteProfiles Protein kinase domain profile. 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4592 Mtr-Chr4 59975498 59978196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4592 1 627 Receptor kinase-like Gene Family AT3G42880 51.074 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g4592 Pkinase 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4592 - - gmx:100788667 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4592 4 59975498 59978196 Mtr4g4592 4 59975498 59978196 ECH
Mtr4g4592 4 59975498 59978196 Mtr2g1660 2 18734207 18738071 PCT