Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4590 ATGTCGACTTCATCGGACATTTCTGGTTTATCCGGCAACAAACTGACAAAATCATCGGAGAAACCTACGTTTTCTCAAACTTGTAATCTATTGAGGCAATACCTCAAGGAGAAGAAGGGTAGTTTCGAAGGCTTTAACCTTCACACTCCTGAAACAAATGGGTCATCACCTGGTTCATCTTCTCACTCTGGAATAACCATGGATTTATTTCCCACAAACGTGACCCCGAAAAACCTTACAACTATGGATTTTTTCTTTCCAAGAGTTGTTAACCCAATGGTTAAAGAGCCTGAAACAGCACAATTGACAATGTTTTATAATGGACAAGTTATTGTGTTGGATGATTTTCCTGCTGAGAAAGTTGAGGAGCTAAAATCATTTGCTAGAACTCAGACTCAGCATTCAGATGTTCCTACTATGATCCCCCAACAACCTCCCTCACTAATTGATATGCCAATAGCTAGAAAAGCTTCACTTCGTCGATTCATGGAGAAGAGGAAAGATAGAGTTTCTGTCTACTCACCATATCAAAGAATCTGTCCTGACTCTGCTGCTCCAGAAAAGCATGCTGAATCCGCTCCATGGCTTGTGTTAGGTGCTAAATCAACGTAA 612 0.4069 MSTSSDISGLSGNKLTKSSEKPTFSQTCNLLRQYLKEKKGSFEGFNLHTPETNGSSPGSSSHSGITMDLFPTNVTPKNLTTMDFFFPRVVNPMVKEPETAQLTMFYNGQVIVLDDFPAEKVEELKSFARTQTQHSDVPTMIPQQPPSLIDMPIARKASLRRFMEKRKDRVSVYSPYQRICPDSAAPEKHAESAPWLVLGAKST* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4590 203 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 199 IPR040390 -
Mtr4g4590 203 PANTHER PROTEIN TIFY 10A 17 199 - -
Mtr4g4590 203 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g4590 203 ProSiteProfiles Tify domain profile. 95 130 IPR010399 -
Mtr4g4590 203 Pfam tify domain 96 124 IPR010399 -
Mtr4g4590 203 Pfam Jas motif 152 177 IPR018467 -
Mtr4g4590 203 SMART tify_2 95 130 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4590 Mtr-Chr4 59958396 59960114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4590 1 201 Tify Gene Family AT1G19180 34.510 6.58e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr4g4590 tify 4.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4590 K13464 - gmx:100802800 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4590 4 59958396 59960114 Mtr4g4590 4 59958396 59960114 ECH
Mtr4g4590 4 59958396 59960114 Mtr2g1663 2 18792499 18794956 PCT