Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4582 ATGATGCAAACACATAACTCCCTCACACTCCATGCTTTCTTCATGATCTTGTTCATGTCACCGACGTTTCCTTCATCCGCAACCGCGGCAAGACCACCGCAAGATCTAATCCGTTCATCATGCGCACAAGCAAGATACCCAACTCTCTGCGTCCAAACCCTAACCAACCAAGTAGGTCTCACAACAAAGCCATTAGACCTAGCTCAAGCCTCCGTCAAAGCCAGTATCACTCACACTCTCACCCTTTCCGTTTACCTCAAGAAAACCCTAAAATCCAATATGGTAGCAGGGTCCACAACCACTTCTAGAACTCGAGTTGCTTTGAGGGACTGCGTTACTCAAATTTCAGACTCGGTTCTTCAGTTAAACCAAACGTTGAACGAGTTAAAACATCTTCGCATGGGAACGTTTGAGTGGCAAATGAGTAACGCTCAAACATGGGCCAGCACTGCTTTTACCAACGGTAACTCTTGTATTAACGGTTTGAACAGAAGCGATGCTGAAAAGAAGGTGAAGTTGGAGGTGAAAAGAAAAGTTACCGATGCATCTATGTTTATAAGTAACGCTCTCTACTTGATCAATCGTCTTGGGGAAAGCATGAATCAAAAGCCTCACTCCAATTCCAATAACTGA 633 0.4455 MMQTHNSLTLHAFFMILFMSPTFPSSATAARPPQDLIRSSCAQARYPTLCVQTLTNQVGLTTKPLDLAQASVKASITHTLTLSVYLKKTLKSNMVAGSTTTSRTRVALRDCVTQISDSVLQLNQTLNELKHLRMGTFEWQMSNAQTWASTAFTNGNSCINGLNRSDAEKKVKLEVKRKVTDASMFISNALYLINRLGESMNQKPHSNSNN* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4582 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 197 IPR035513 -
Mtr4g4582 210 SMART PMEI_2 32 192 IPR006501 GO:0004857
Mtr4g4582 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 6 205 - -
Mtr4g4582 210 Pfam Plant invertase/pectin methylesterase inhibitor 35 191 IPR006501 GO:0004857
Mtr4g4582 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 196 IPR006501 GO:0004857
Mtr4g4582 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 205 - -
Mtr4g4582 210 CDD PMEI-like_3 39 196 - -
Mtr4g4582 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4582 Mtr-Chr4 59892621 59893584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4582 36 210 Carbohydrate Esterase AT3G14310 29.670 2.01e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4582 - - mtr:MTR_4g124855 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4582 4 59892621 59893584 Mtr4g4582 4 59892621 59893584 ECH