Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4576 ATGGACGATGCTGGAGTCTCGAAATTAACTGCTAAATTGAAGGAAATATTTCAAAAGTGGCAAGTGGGTTATAAAGAGGGCAATGATGAACATTCTGGTGTGAATCATGGGGGAATATCACCTATGATTAACAAAAGGTTAAACAGTTTAATGTCTTTTGATTCTGATGAAGATAGCTGCAATAGTCCTAAAGCACCGCACGATGTTCCCAAAGGATACTTAGCTGTCTATGTTGGTCCTGAGCTTAGGAGATTCATCATTCCAACAAGCTACCTTAGTCACTCTCTTTTCAAAATGTTGTTGGAAAAAGCTGCTGATGAATTTGGTTTTAATCAGTGTGGTGGACTTACAATTCCATGTGAAATTGAAACCTTTAAATACCTTCTCAGCTGTATGGAGAATACTCAGCTTCATCATGATCACACCTCTTCTGGAAACACAGGAACTGTGGAAGAGAGAATAAACTAA 468 0.3825 MDDAGVSKLTAKLKEIFQKWQVGYKEGNDEHSGVNHGGISPMINKRLNSLMSFDSDEDSCNSPKAPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFNQCGGLTIPCEIETFKYLLSCMENTQLHHDHTSSGNTGTVEERIN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4576 155 PANTHER SMALL AUXIN-UP RNA-RELATED 5 151 - -
Mtr4g4576 155 Pfam Auxin responsive protein 52 131 IPR003676 GO:0009733
Mtr4g4576 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 151 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4576 Mtr-Chr4 59834356 59835955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4576 1 143 Calmodulin-binding Proteins AT5G20810 60.645 1.29e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4576 K14488 - gmx:100795275 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4576 4 59834356 59835955 Mtr4g4576 4 59834356 59835955 ECH
Mtr4g4576 4 59834356 59835955 Mtr2g1686 2 19277308 19280270 PCT