Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4575 ATGAGTCAAGTTGAAACTGGAGCGAAGTTATTGGCTACACTAGCACTTGCTCTCTTTCATCTTCTTCCAGTAACCCCTACATTGTCCGAATTTAACCGTCACCGTGAAATTACATTGTTAGAGGAACACTTAACTGCTGCGGAAACCACCGTTAGAGTGGTCAGAGTTCGGAAAGACGGAACCGGAGATTTTACGACGGTGACGGATGCCGTTAAAAGCATTCCGTCAGGAAACAAAAGGAGAGTGGTGGTGTGGATTGGTATGGGAGAATATAGAGAGAAAATAACGGTTGATAGGTCGAAACGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAAAGACAATGACATGATGCCCATTATAACGTACGACGCAACCGCTTTGCGTTATGGGACACTTGATAGTGCAACTGTCGCTGTTGATGCTGACTACTTTGTTGCTGTCAATGTAGCATTTGTGAACTCGTCTCCTATGCCGGACGAAAATAGTGTTGGAGGACAAGCATTAGCGATGAGGATATCAGGGGATAAGGCTGCATTCTACAACTGCAAGTTCATCGGATTTCAAGATACCTTGTGTGATGACTATGGCAAACATTTTTTCAAGGACTGCTTTATTCAAGGAACCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAACTACTATAGAATCGGTTGCAAAGGGTTTGAATGTCATCACAGCACAAGGTAGGGAAAGAATGTCGGACGACACTGGATTCACTTTTGTTCATTGCAACATAACTGGAAGTGGTCACAGGAACACTTACCTTGGTCGTGGTTGGAGGAGGAGCCCTAGGGTTGTATTTGCCTATACCTATATGGACTCTGTCGTCAATTCCAGAGGATGGTACCACCATGGGTCCAATGAGACAATCTTCTTCGGAGAATACAAGTGCAGTGGACCCGGTGCTGTTAGGTTAAACTATAAAAGGATACTATCTGATGAAGAAGCAAAACACTTCTTGAGCATGGCTTATATTCATGGAGAACAGTGGGTTCGCCCACCTCCCAAACTTTGA 1050 0.4381 MSQVETGAKLLATLALALFHLLPVTPTLSEFNRHREITLLEEHLTAAETTVRVVRVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDRSKRFVTFYGERNGKDNDMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCKFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIYLRTTIESVAKGLNVITAQGRERMSDDTGFTFVHCNITGSGHRNTYLGRGWRRSPRVVFAYTYMDSVVNSRGWYHHGSNETIFFGEYKCSGPGAVRLNYKRILSDEEAKHFLSMAYIHGEQWVRPPPKL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4575 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 348 - -
Mtr4g4575 349 SUPERFAMILY Pectin lyase-like 52 345 IPR011050 -
Mtr4g4575 349 Gene3D - 48 346 IPR012334 -
Mtr4g4575 349 Pfam Pectinesterase 54 339 IPR000070 GO:0030599|GO:0042545
Mtr4g4575 349 PANTHER PECTINESTERASE 29 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4575 Mtr-Chr4 59828074 59829812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4575 40 349 Carbohydrate Esterase AT1G69940 50.633 1.18e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4575 K01051 - gmx:100790786 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4575 4 59828074 59829812 Mtr4g4575 4 59828074 59829812 ECH