Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4564 ATGGCGTTTCAAGATTTCGACCTCATCAATGAACGACGAAAAAGTGAGAAGAGAGCACAAATGAGGAAAAGGATCATCATTGGAGTTATTTCTTCCGTTGTCTTCGTCGGTCTCATAGGTTGTGCATTCTTTGTTGCTACCACAAAATACAATCCTTTTGGTGGTGGTGGTGGTGGTAGTCATCCAGAAGACAGTTCAACCGCTAATGGTAGCAAACATGTTGCACATTCAGAAAAGGTAGTGAAATTGGTATGCAGTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTAACAAAGCAGTGGAAAAGGATCCTAAACTTCAACACCCTAAAGACCTTCTCAAAGTTTATCTTAAAACTGTAGAGGATGAGGTTAACAAAGCCTTCAACAAAACAAATTCATTCAAATTTAACACTAAAGAAGAGAAAGCTGCATTTGAGGATTGTAAAGAGATGATTCAATACGCTAAGGATGATTTAGCTACCTCTATTGATCAACTTAGTGAAGCTGACATGAAAAAACTTGCTTCAAAAACACCTGACTTGAACAGTTGGTTAAGTGCTGTTATCACTTTCCAAGAAACTTGCGTTGATGGTTTTCCTGATGGAAAATTGAAGACTGATCTTCAGAAATTGTTTCAGGGTTCTAGGGAATTTGTTAGCAATTCTCTTGCTATTGTGTCTCAGGTTTCTACATTCCTTTCTTCATTGCAGACAATGGGGGCCCCCCGTATGTTGTTGTCTGATAACTCCCCTGTTGCTTCTATGGATTCTGAAGGTATTCCTTCATGGATTCAATCTGAAGAGAGAAGGGTGTTGAAGGCTGCTGATATTAGACCTAAACCTAATGTCGTTGTTGCTAAAGATGGCAGTGGTAACTTCAGAACCATCTCTGCAGCTTTGGCCGCCATCCCTCCAAATTTCCTTGGAAGGTATGTGATTTATGTTAAAGAAGGAGTGTACGATGAGGTAGTGACAATAACAGATAAAATGAAAGATATAACCATCTATGGTGATGGATCACAAAAGAGTATCATCACTGGTAGCAAAAACTTTAGGGATGGAGTCACGACCATCAACACCGCAAGTTTTGTGGTGCTAGGAGAAGGATTTTTGGGTCTAGCAATGGGATTCAGAAACACAGCTGGTCCTGAAGGACATCAAGCAGTAGCAGCTAGAGTCCAAGCAGATCGTGCTGTGTTTGCCAACTGCCGTTTTGAAGGCTTCCAAGACACGCTATACACAGTGGCACATAGACAATTCTTCCGTAGCTGCATCATAACAGGAACAATCGATTTCATCTTTGGTGACGCAGCCGTTATATTCCAAAACTGCATCTTGGTTGTTAAAAAACCAAGTGTCGGCCAAAGTAACGCGGTGACAGCACAAGGAAGATTGGACAACAAACAAAATACAGCAATTGTTCTACATAAATGTACAATTAAAGCTGATGACGCATTGGTTCCTGTTAAAGCCACAGTAAAAAGTTACCTTGGTAGACCTTGGAAGCAATTTTCAAGAACAGTTGTTATGGAAAGTGATATTGGTGATTTTATTAGCCCTGAGGGATGGTCACCTTGGAATGGAAACTTTGCTTTAAGTACACTGTATTATGCTGAGTATGCTAACACTGGACCTGGTGCTAGTACTACTGCTAGAGTTAAGTGGCCTACTTTCAAAGTTATTAACAAAGCAGAAGCTAGTAAGTGGACTGTAGGAACATACTTGACAGGTACATGGGTTCAAAACTCAGGTGTACCTTCACAGCTTGGATTGTACAAATAA 1788 0.4038 MAFQDFDLINERRKSEKRAQMRKRIIIGVISSVVFVGLIGCAFFVATTKYNPFGGGGGGSHPEDSSTANGSKHVAHSEKVVKLVCSSADYKEKCEGPLNKAVEKDPKLQHPKDLLKVYLKTVEDEVNKAFNKTNSFKFNTKEEKAAFEDCKEMIQYAKDDLATSIDQLSEADMKKLASKTPDLNSWLSAVITFQETCVDGFPDGKLKTDLQKLFQGSREFVSNSLAIVSQVSTFLSSLQTMGAPRMLLSDNSPVASMDSEGIPSWIQSEERRVLKAADIRPKPNVVVAKDGSGNFRTISAALAAIPPNFLGRYVIYVKEGVYDEVVTITDKMKDITIYGDGSQKSIITGSKNFRDGVTTINTASFVVLGEGFLGLAMGFRNTAGPEGHQAVAARVQADRAVFANCRFEGFQDTLYTVAHRQFFRSCIITGTIDFIFGDAAVIFQNCILVVKKPSVGQSNAVTAQGRLDNKQNTAIVLHKCTIKADDALVPVKATVKSYLGRPWKQFSRTVVMESDIGDFISPEGWSPWNGNFALSTLYYAEYANTGPGASTTARVKWPTFKVINKAEASKWTVGTYLTGTWVQNSGVPSQLGLYK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4564 595 CDD PMEI-like_3 83 233 - -
Mtr4g4564 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 231 IPR035513 -
Mtr4g4564 595 Gene3D - 279 593 IPR012334 -
Mtr4g4564 595 PANTHER PECTINESTERASE 14 593 - -
Mtr4g4564 595 PANTHER PECTINESTERASE 14 593 - -
Mtr4g4564 595 Pfam Pectinesterase 284 579 IPR000070 GO:0030599|GO:0042545
Mtr4g4564 595 Pfam Plant invertase/pectin methylesterase inhibitor 80 227 IPR006501 GO:0004857
Mtr4g4564 595 SMART PMEI_2 76 227 IPR006501 GO:0004857
Mtr4g4564 595 ProSitePatterns Pectinesterase signature 2. 428 437 IPR033131 -
Mtr4g4564 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 232 IPR035513 -
Mtr4g4564 595 SUPERFAMILY Pectin lyase-like 281 586 IPR011050 -
Mtr4g4564 595 TIGRFAM PME_inhib: pectinesterase inhibitor domain 74 231 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4564 Mtr-Chr4 59674635 59676856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4564 1 594 Carbohydrate Esterase AT4G33230 48.689 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4564 4 59674635 59676856 Mtr4g4564 4 59674635 59676856 ECH
Mtr4g4564 4 59674635 59676856 Mtr2g1711 2 19581780 19584545 PCT