Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4562 ATGGAACTATGTTCCTCAAAACAGCCATCCACAACAACACTCTCAATAACTACATTCATCTTCTTCTTCCTCCTCCTCCTCTCACTCCCACACTCCACTTTTGCTTCTTCTCCCAATGACTTTGTTGGTTCATCCCTCAGAGTTTCTACCGCCAAATTTGCCAACTCTGCTGAAGAAGTTATCACCGTTTTACAAAAAGTCATCTCTATTTTATCACGCTTCACTAATGTCTTTGGTCACTCTCGCACCTCAAACGCCGTTTCGGATTGCCTCGATTTACTTGACATGTCCTTAGACCAACTTAACCAGTCCATTTCCGCTGCTCAAAAGCCCAAAGAGAAGGATAACAGCACAGGAAAACTAAACTGTGATCTAAGGACATGGCTGAGTGCTGTTCTTGTGTATCCAGACACATGTATAGAAGGATTAGAAGGTTCAATTGTAAAGGGTCTTATATCCTCTGGTCTCGATCATGTAATGTCCTTGGTGGCGAATCTTCTTGGTGAAGTAGTTTCCGGCAATGATGATCAACTCGCAACCAACAAGGATCGATTTCCTTCGTGGATCAGAGATGAGGACACAAAGTTGTTGCAGGCAAATGGTGTGACGGCTGATGCTGTTGTGGCTGCTGATGGAAGTGGAGACTACGCTAAGGTGATGGATGCCGTATCGGCAGCACCTGAAAGCAGCATGAAAAGATATGTAATATATGTGAAAAAAGGTGTTTATGTTGAAAATGTTGAGATTAAGAAGAAGAAATGGAATATCATGTTGATTGGTGAAGGCATGGATGCTACTATCATCTCCGGCAGTCGGAATTATGTGGACGGTTCGACAACTTTCCGGTCAGCTACCTTTGCTGTAAGTGGTAGAGGGTTCATAGCACGCGACATTTCATTTCAGAACACCGCAGGTGCCGAGAAGCACCAAGCAGTGGCGTTAAGATCAGACTCTGACCTCTCAGTATTTTATCGGTGTGGGATATTCGGTTATCAAGATAGCCTATATACTCACACCATGCGTCAGTTCTACCGTGAATGCAAAATTAGTGGTACTGTGGATTTCATCTTTGGAGACGCCACGGCTGTGTTCCAAAACTGTCAAATACTAGCCAAGAAAGGGATGCCTAAACAAAAGAACACTGTTACTGCTCAAGGACGAAAAGACCCGAACCAACCAACTGGTTTCTCCTTCCAATTTTGCAACATTTCCGCAGATTCTGACCTTCTACCATCGGTCACAACCATCCCAACATACCTTGGTAGACCCTGGAAGACTTATTCGCGAACAATTTTTATGCAATCCTACATGAGTGACGCAATAAGGCCAGAAGGGTGGTTAGAGTGGAACGGTAATTTTGCTTTGAACACATTGTACTACGCTGAATACATGAACTCTGGACCGGGTGCCGGGGTAGCTAACCGGGTGAAATGGTCAGGATACCATGTATTGAATGATTCGAGTGAGGCTACTAAATTCACTGTGGCTCAATTTATTGAGGGGAATCTTTGGTTACCTTCCACCGGTGTAACTTACACTTCTGGTTTGAAAGTGTAA 1557 0.4406 MELCSSKQPSTTTLSITTFIFFFLLLLSLPHSTFASSPNDFVGSSLRVSTAKFANSAEEVITVLQKVISILSRFTNVFGHSRTSNAVSDCLDLLDMSLDQLNQSISAAQKPKEKDNSTGKLNCDLRTWLSAVLVYPDTCIEGLEGSIVKGLISSGLDHVMSLVANLLGEVVSGNDDQLATNKDRFPSWIRDEDTKLLQANGVTADAVVAADGSGDYAKVMDAVSAAPESSMKRYVIYVKKGVYVENVEIKKKKWNIMLIGEGMDATIISGSRNYVDGSTTFRSATFAVSGRGFIARDISFQNTAGAEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQFCNISADSDLLPSVTTIPTYLGRPWKTYSRTIFMQSYMSDAIRPEGWLEWNGNFALNTLYYAEYMNSGPGAGVANRVKWSGYHVLNDSSEATKFTVAQFIEGNLWLPSTGVTYTSGLKV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4562 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 171 IPR035513 -
Mtr4g4562 518 Pfam Plant invertase/pectin methylesterase inhibitor 31 167 IPR006501 GO:0004857
Mtr4g4562 518 ProSitePatterns Pectinesterase signature 1. 230 249 IPR018040 -
Mtr4g4562 518 Gene3D - 199 516 IPR012334 -
Mtr4g4562 518 PANTHER PECTINESTERASE 179 516 - -
Mtr4g4562 518 PANTHER PECTINESTERASE 49 171 - -
Mtr4g4562 518 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 179 516 - -
Mtr4g4562 518 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 49 171 - -
Mtr4g4562 518 CDD PMEI-like_4 35 174 - -
Mtr4g4562 518 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Mtr4g4562 518 Pfam Pectinesterase 205 502 IPR000070 GO:0030599|GO:0042545
Mtr4g4562 518 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Mtr4g4562 518 SMART PMEI_2 11 169 IPR006501 GO:0004857
Mtr4g4562 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 167 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4562 Mtr-Chr4 59646828 59650040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4562 17 516 Carbohydrate Esterase AT3G43270 59.768 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4562 K01051 - gmx:100814987 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4562 4 59646828 59650040 Mtr4g4562 4 59646828 59650040 ECH
Mtr4g4562 4 59646828 59650040 Mtr2g1716 2 19696898 19702442 PCT