Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4561 ATGGAACTATGTTCCTCAAAACAGCCATCCACAACAACACTCTCAATAACCTCATTCATCTTCTTCTTCCTACTCCTCTCACTCCCTCACTCCACATCTGCTTCTTCTCCCAATAACTTTGTTGGTTCATCCCTCAGAGTTTCTCCCACCAAATTTTCCAACTCTGCCAATGAAGTTAAAACCGTTTTACAAAAAGTCACCTCCATTTTATCAACCTTCACCTACACCTTCAGCCATCACTCAAATGCCATTTCCGATTGCCTCGATTTACTCGACATGTCCTCCGACCAACTTAGTTGGTCTGTTTCCGCTACTCAGAATCCCAAAGGGAAGAATAACAGTACTGGAAATCTAAGCTCTGATCTAAGAACATGGCTCAGTGCTGTTCTTGTGAATACAGACACTTGTTTAGAAGGATTACAAGGATTACAAAGTACATTTGCAAAGAGTGATGTATCAAGCGGTCTTGATCGTGTATTGTCATTGGTGAAGAAGAATCTTTTTGAAGTAGTCCTCAGCAACGATCAACTTGCAACTGCTACCTCCGAAGATAGATTTCCTTCGTGGATTAACGACGGAGACAAGAAGTTTTTTGAGGCAAATGAAACGACTGCTGATGCTATTGTGGCGGCTGATGGGAGTGGGAACTACACTACAGTGATGGATGCCGTATTGGCAGCACCTAAATTCAGCATGAGAAGATATGTTATATATGTGAAAAAAGGTGTATATGTTGAGAATGTTGAGATTGATAGGAAGAAATGGAATATTATGATGATTGGTGAAGGTATGGATGCTACTATTATCTCCGGTAGTCGGAATCGTGTGGATGGTTGGACTACTTTCCGATCAGCTACCTTTGCTGTTAATGGTAGAGGGTTCATAGCATGCAACATTTCATTTCAAAACACCGCAGGTCCCGAGAAGGAACAAGCAGTGGCTTTAAGATCGGACTCTGACCTCTCTGTATTTTATCGGTGTGGGATATTCGGTTATCAAGATAGCCTATATACCCATACACAGCGCCAATTCTACAAAGCGTGTAAAATCACTGGTACGGTGGATTTCATTTTTGGAAATGGCACAGTTATGTTCCAGAATTGCGAAATTCTAGCCAAGAAAGGGATGCAAGGACAAAAGAATACTGTCGCGGCCCATGGACGAACAGACCCGAACGTAACAACCGGTTTCTCCTTCCAATTCTGCAACATTTCAGCAGACTTTGACCTTCTACCTTTTATTGCAACCATCCGAACATACCTTGGTAGACCTTGGAGGCCTTATTCGCGAACAATTTTCATGCAATCCTATATGAGTAACGCGATAAGTCCCGAAGGGTGGCTAGAGTACAATGGAAGTGTTGGTTTGGATACATTGTACTACAGTGAATACATGAACTCCGGACCGGGTGCTGGGGTAGCGAATCGGGTGAAATGGTCTGGGTACCATGTAATGAATGATTCGAGCGAGGCTGAAAAGTTTACTGTAGCTCAATTTATTTTGGGGGATCTTTGGTTACCTTCCGCTGGAGTAACTTACACTGCAGGTTTGACAGTGTAA 1560 0.4282 MELCSSKQPSTTTLSITSFIFFFLLLSLPHSTSASSPNNFVGSSLRVSPTKFSNSANEVKTVLQKVTSILSTFTYTFSHHSNAISDCLDLLDMSSDQLSWSVSATQNPKGKNNSTGNLSSDLRTWLSAVLVNTDTCLEGLQGLQSTFAKSDVSSGLDRVLSLVKKNLFEVVLSNDQLATATSEDRFPSWINDGDKKFFEANETTADAIVAADGSGNYTTVMDAVLAAPKFSMRRYVIYVKKGVYVENVEIDRKKWNIMMIGEGMDATIISGSRNRVDGWTTFRSATFAVNGRGFIACNISFQNTAGPEKEQAVALRSDSDLSVFYRCGIFGYQDSLYTHTQRQFYKACKITGTVDFIFGNGTVMFQNCEILAKKGMQGQKNTVAAHGRTDPNVTTGFSFQFCNISADFDLLPFIATIRTYLGRPWRPYSRTIFMQSYMSNAISPEGWLEYNGSVGLDTLYYSEYMNSGPGAGVANRVKWSGYHVMNDSSEAEKFTVAQFILGDLWLPSAGVTYTAGLTV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4561 519 CDD PMEI-like_4 34 174 - -
Mtr4g4561 519 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Mtr4g4561 519 Pfam Pectinesterase 206 503 IPR000070 GO:0030599|GO:0042545
Mtr4g4561 519 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 48 517 - -
Mtr4g4561 519 SUPERFAMILY Pectin lyase-like 205 516 IPR011050 -
Mtr4g4561 519 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Mtr4g4561 519 PANTHER PECTINESTERASE 48 517 - -
Mtr4g4561 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 155 IPR035513 -
Mtr4g4561 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 171 IPR035513 -
Mtr4g4561 519 Pfam Plant invertase/pectin methylesterase inhibitor 27 158 IPR006501 GO:0004857
Mtr4g4561 519 Gene3D - 200 517 IPR012334 -
Mtr4g4561 519 SMART PMEI_2 11 162 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4561 Mtr-Chr4 59646754 59655675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4561 19 517 Carbohydrate Esterase AT3G43270 56.395 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4561 K01051 - gmx:100777500 658.677