Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4549 ATGGCGACGCCTAATGTGACATGTCCTGCACCGATGAAAGCCACGTCTAATGGTGCTTTCCAACACGAAAATCCTCTCGATTATGCACTTCCGTTGTTGATTCTTCAGATATGTGTGGTTGTCACGTTCACTAGATGTATTGCATACCTTTGCAAACCACTCAAACAACCTCGAGTCATTGCAGAAATCATTGGAGGAATACTGCTTGGACCATCAGCAATAGGTCGAAGCGAGAAATTCCTACACACAGTTTTCCCAAAGAGAAGCTTAACAGTCCTAGACACACTAGCCAACATTGGTCTTTTGTTCTTCTTATTCCTAGTAGGTCTTGAACTCGACATGCGTTCAATCCGTAGAACAGGTAAAAAAGCCTTAGCAATTGCCCTTTGTGGAATCACATTCCCATTTGTTCTTGGCATAGGAACATCCGTTGTTCTTAGAGCCACAATCTCCAAAGGTGCACAACCTGTCCCTTTCCTTGTCTTCATGGGTGTTGCTCTCTCAATCACAGCATTTCCCGTCCTCGCTCGAATCCTAGCTGAGCTCAAACTGCTAACCACGGATGTTGGTCGTATAGCAATGTCAGCAGCTGCTGTTAATGATGTTGCAGCCTGGGTACTTCTTGCTCTAGCCATATCATTATCTGGCGATGACACGTCGCCCCTGATTTCACTTTGGGTTATGCTCTGTGGTACTGCTTTTATTCTCTTTGCAGTTTTTGCTATAAGACCGTTGCTTGCATACATGGCTAAGCGTTCCCCTGAGGGTGAACCTGTTAAAGAGCTTTACATTTGTATCACATTGACATTGGTTTTGGCTTGTAGTTTTGTTACTGATACTATTGGAATTCATGCATTATTTGGTGCTTTTGTTATTGGTATAATTATGCCTAAAGATGGTCCTTTTGCTGGTGTTTTAATTGAGAAGATTGAAGATCTTGTGTCTGGAATCTTTTTGCCACTCTATTTTGCTTCTAGTGGTTTGAAGACAAATGTGGCTACTATAAGTGGAGGGGTTTCTTGGGCACTATTATTACTAGTTATATTTACTGCTTGCTTTGGAAAAATCGTTGGTACAATCTCAGTATCATTGCTATGCAAGGTGCCTTTTAGAGAAGCTCTTGCACTTGGATTTCTCATGAACACCAAGGGATTGGTTGAACTCATTGTTCTCAACATCGGAAAGGATCGCAAGGTACTAAATGACCAAGCATTTGCAATTTGTGTTCTTATGGCATTATTCACAACCTTCATCACCACCCCAATAGTGATGGCAGTATACAAACCAGCTCGAAGAGGAGCACCTTATAAACACAAAACAGTCCAACGCAAAGATCAAGAATCAGAGCTCAGAGTCTTGGCATGTTTCCACAGCACACGCAACATCCCTACACTAATCAACCTTGTAGAATCATCCCGAGGAACCCGAAAGCGAGGAAGACTCTGTATCTATGCAATGCACTTGATGGAACTCTCAGAAAGATCTTCAGCTATCTCCATGGTTCACAAAGCACGTAACAATGGAATGCCCTTTTGGAACAAAAAACAAAATGATGAAGATCAAATGGTTATCGCTTTCCAAACCTATGGAAAATTGAACAGTGTCAATGTTCGTCCCATGACAGCCATTTCTGCTCTCAGCAACATCCATGAAGATATTTGTACTAGTGCTCATCAAAAGCGTGCCTCGATAATACTCCTTCCATTCCATAAACACCAGCGTATAGATGGAACGATGGAGTCATTAGGACATTCATTTCATGTAATGAATGAGCTTGTGTTGAGTCATGCACCTTGTTCTGTTGGAATTTTGATTGATCGCGGTCTCGGAGGAACAAGTCAAGTTCAAGCAAGTGAAGTTTCCTTTAAGGTTGTTGTAATCTTCTTCGGAGGACGCGACGATCATGAAGCACTTGCTTATGGTATGAGAATGGCAGAACATCCAGGAATTTTACTCCATGTTGTTAAGTTCATTTCTCCACCTGGAATGACATTGTCTTTTGGTGCTAAATTGGTTGGTGTAGCACAAGATAAGAGCAAAACAGTTGTGATTGATGATATTGAAGGTAGCCATGATGGTAGTAAAAATCAAGATGAACAACTCTGGAGTGAATTCCATAGTGCAAAGAGCATGAATGAAGAGTCAATTAAGTATGAGGAAAGGATGGTTGAAAGTAAAAATGATATTGAGACAGCATTGAAGGAATTGAGTAAGAGTAATTTGATATTGGTTGGTAGAATGCCACCAGTTGCACCATTGGTTAGTAACAGTGATTCTGCTGAACTTGGACCTATTGGAAGTTATATGGCTTCTTCTAGTTTCTCAACTTCTGCATCAATCTTGGTGATTCAACAATATAATTCAACTACTGATATTCATCCTCTTGTTATGGAGGAATTGGATTGTCCTGAAGTGCCAGACACACCAACACGTTAG 2436 0.4117 MATPNVTCPAPMKATSNGAFQHENPLDYALPLLILQICVVVTFTRCIAYLCKPLKQPRVIAEIIGGILLGPSAIGRSEKFLHTVFPKRSLTVLDTLANIGLLFFLFLVGLELDMRSIRRTGKKALAIALCGITFPFVLGIGTSVVLRATISKGAQPVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWVLLALAISLSGDDTSPLISLWVMLCGTAFILFAVFAIRPLLAYMAKRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVIGIIMPKDGPFAGVLIEKIEDLVSGIFLPLYFASSGLKTNVATISGGVSWALLLLVIFTACFGKIVGTISVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTVQRKDQESELRVLACFHSTRNIPTLINLVESSRGTRKRGRLCIYAMHLMELSERSSAISMVHKARNNGMPFWNKKQNDEDQMVIAFQTYGKLNSVNVRPMTAISALSNIHEDICTSAHQKRASIILLPFHKHQRIDGTMESLGHSFHVMNELVLSHAPCSVGILIDRGLGGTSQVQASEVSFKVVVIFFGGRDDHEALAYGMRMAEHPGILLHVVKFISPPGMTLSFGAKLVGVAQDKSKTVVIDDIEGSHDGSKNQDEQLWSEFHSAKSMNEESIKYEERMVESKNDIETALKELSKSNLILVGRMPPVAPLVSNSDSAELGPIGSYMASSSFSTSASILVIQQYNSTTDIHPLVMEELDCPEVPDTPTR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4549 811 Gene3D - 32 434 IPR038770 -
Mtr4g4549 811 PANTHER CATION/H+ EXCHANGER 3 1 807 - -
Mtr4g4549 811 PANTHER CATION/H + ANTIPORTER 1 807 - -
Mtr4g4549 811 Coils Coil 708 728 - -
Mtr4g4549 811 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4549 Mtr-Chr4 59521802 59529369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4549 1 801 Antiporter Super Family AT3G17630 70.522 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4549 - - lang:109362195 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4549 4 59521802 59529369 Mtr4g4549 4 59521802 59529369 ECH