Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4540 ATGAGATGTGGTTTTCTTTTGTTTGTGTCAACACTAATTCTTAGCAGTTCGTTGTCATATGCCTACACATATAATGTTGGTGCCAAAGATGGTTGGACAGTCAAACCCTCACAAGATTACAACTACAATTTCTGGGCTAGTAATATTAGGTTTCAAATCAACGACACGCTTTTTTTCAAGTATCAAAAAGGTTCTGATTCGGTGCTAGTGGTAAACAAACAAGACTATGATTCTTGCAACATCAATAACCCGATCCACAATATGGACAATGGAGATTCAAGTTTTCTATTGGACAAGTCAGATCACTATTACTTCATTAGCGGAAAAGATTTGAATTGCGTAAATGGTGAAAAGTTTAATCTTGTTGTTTTGTCTCCACACCACCATCACTACCATGAACATCATGGTCCATCATTATCTCCCGCGGTTGCACCGGTACATCCCCCAACATCGCCTTCACCATGGAATGCTCCAACACCGGATGCTCATGGCACAGCTGTTCCGACACCAAGTGCTCGTGATATGACTACTCTGACATCCAGCGGTGTTCACAATGGGAATGCTCCGGCGATTGCTCCTGCATCGAATGATCATGGTCATAATTCTCCGGCGCCGTCTCCTGCTCGTTCGGATTCTACTAGGTTGACCGGTTCCGTTGGTGTTATTGTTATGGTGGTTTTGGTCTTAGGAAGCTTTACCTTTTTTCATGGGTAG 714 0.4286 MRCGFLLFVSTLILSSSLSYAYTYNVGAKDGWTVKPSQDYNYNFWASNIRFQINDTLFFKYQKGSDSVLVVNKQDYDSCNINNPIHNMDNGDSSFLLDKSDHYYFISGKDLNCVNGEKFNLVVLSPHHHHYHEHHGPSLSPAVAPVHPPTSPSPWNAPTPDAHGTAVPTPSARDMTTLTSSGVHNGNAPAIAPASNDHGHNSPAPSPARSDSTRLTGSVGVIVMVVLVLGSFTFFHG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4540 237 CDD OsENODL1_like 22 124 IPR041846 -
Mtr4g4540 237 MobiDBLite consensus disorder prediction 170 186 - -
Mtr4g4540 237 MobiDBLite consensus disorder prediction 130 213 - -
Mtr4g4540 237 Pfam Plastocyanin-like domain 32 116 IPR003245 GO:0009055
Mtr4g4540 237 MobiDBLite consensus disorder prediction 142 156 - -
Mtr4g4540 237 SUPERFAMILY Cupredoxins 20 124 IPR008972 -
Mtr4g4540 237 MobiDBLite consensus disorder prediction 199 213 - -
Mtr4g4540 237 PANTHER EARLY NODULIN-LIKE PROTEIN 1 229 - -
Mtr4g4540 237 PANTHER BLUE COPPER PROTEIN 1 229 IPR039391 GO:0009055
Mtr4g4540 237 Gene3D - 20 127 IPR008972 -
Mtr4g4540 237 ProSiteProfiles Phytocyanin domain profile. 22 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4540 Mtr-Chr4 59442464 59443804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4540 5 170 Phytocyanin Superfamily AT4G28365 44.379 9.92e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4540 - - mtr:MTR_4g124280 481.1