Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4528 ATGTTGGCCAAGGCTAGCTTGGATGGAGATATTGCTTCAACTGAGATGACAGGGTCAACAAGTCATCATCCACCAGTTCCTGCAGGTGCTGAAAATGTTCAAGAAATGGCTGACATGCAACATGATTCCAAGAATAACAAGGTGAAGGATCAAAGCAATAAGACAGTACCCTTTTACAAGCTTTTCACATTTGCAGACTCATGGGATTATTTGTTGATGTTTGTTGGGACTATAAGTGGCGTTGGGAATGGAATCTCTATGCCTTTAATGACTATAATTATTGGAGATGCTATTAATGCTTTTGGAGGAAATGTTAGCACTAAACAAGTAGTTCATCAAGTTTCCAAGGTGTCTGTCAAGTTTGCAATCATGGGTGCATGTGCCTTTTTTGCAGCGTTTCTACAGGTGTCTTGTTGGATGATCACAGGGGAGAGACAGGCTGCAAGAATAAGGGCATTATACCTCAAAGCAATTTTAAGGCAAGATATCAGTTTCTTTGACAAGGAAACAAATAGTGGTGAGGTTGTTGGAAGAATGTCAGGTGATACAGTTCTTATTCAAGAAGCCATGGGAGACAAGGTAGGAAAATTCATACAATATGTGTCATGTTTTTTAGGAGGTTTAGTTGTGGCATTCATCTTGGGTTGGCTTTTAACCCTTGTCCTTCTATCGTCTATTCCTCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCTTTCGCAATGATGGCATCCCGTGGACAAACGGCATATTCTGAAGCAGCAACTATAGTAGAGCAGATAATCGGTTCAATTCGAACAGTTGCATCATTTACCGGCGAGAAACAAGCTATATCTCAATACAATCAATCCTTAGCTAAAGCTTACAAAGTTGGAGTACAAGAGGGATTGGCTATTGGTTTAGGCCTCGGTTCGGTTCGTTTATTTGTTTACTGCAGTTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGGTACTTGAGAAAGGTTATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCAGTACTAACTGGTTCCTTGTCTCTAGGACAAGCAACTTCGAGCTTAACAGCATTTTCTGCTGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATCAAAAGGAAGCCGGAAATTGATGCTTATGACAAAATCGGGCTAAAGCTTAATGACATTCAGGGAGACATAGAGCTTAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTAATATTCAATGCATTTTCTCTTTCGATATCAAGTGGTACTACCGTGGCTTTAGTCGGGCAAAGTGGGAGTGGAAAATCAACAGTGATAAATTTGATAGAGAGATTTTATGATCCACAGGATGGTCAAATTATCATTGACGGTATTGACCTCAGAGAATTTCAATTGAAATGGATCAGACAGAAAATAGGCCTAGTGAGTCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGATGCGGCAACCGATGAAGAAATCCGAGCTGCAGCAGAACTTGCTAATGCTGCTAACTTCATCGATAAATTTCCTCTTGGACTTGAAACGATGGTCGGTGAGCATGGAGCACAACTCTCTGGAGGCCAAAAGCAAAGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCCCTTGATGCAGAATCTGAAAGAGTAGTACAAGAGACCCTGGACAGAATTATGATAAACCGAACAACCATCATTGTAGCTCACCGCCTAAGCACAATAAGGAACGCTGATATCATTGCTGTTATTCACGAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGAGCTCACTAAAAATCCTGATGGAGCTTATAGTCAACTCATTAGATTGCAAGAAATTAAAAAGGATTCATCAGAACAGTTTGGTGATAATGACTCGGATAAGCTAGAAAACTTTGTAGACTCTGGAAGAGAGTCAAGCCAAAGGTCTTTAAGCCGCGGATCATCAGGGATTGGAAACAGTAGTCACAACTCATTCATAGCATCAAATTCTATGCCAGACACACTAGTAGGAGGGTCTGAAGTTGTTCCTTCAGCAAAAGCATCATCAACTAAAACTCGAGATGCCCCATTTTTTCTCCTTGCTTATCTTAACAAGCCTGAAATCCCGGTGTTACTCATGGGAGCTCTGGCAGCAACAGTAAATGGTGCAATGTTACCTATTCTGGGCCTTCTAATCTCCAAAATGATAAATACATTTTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAATTTTGGGCATTAATATTTGTTTCCCTTAGCGTGGCATCTTTCATTTTTCATCCGTTAAGGTCATACTCTTTTGCTGTAGCTGGTTCTAAATTGATAAAAAGAATCCGGTTAATGTGCTTCGAGAAAATAATTCACATGGAAGTAGGATGGTTTGATAAAGCTGAGAATTCAAGTGGTGCGCTTGGTGCAAGGCTGTCAACTGATGCTGCTTCGATTCGAACTTTGGTTGGTGACGCACTCGGTTTGCTTGTTCAAGATATCTCTACAGTTATTACAGCCTTGGTAATTTCCTTTCAGGCAAATTGGCAGCTTTCTCTCATCATTCTTGTTTTGTTGCCTCTACTATTAGTAAATGGATATTTTCAAATCAAGGCCATGCAAGGATTCAGCACAGACGCAAAGAAACTATACGAGGAAGCAAGTCAAGTAGCGAACGACGCAGTAGGGAATATCAGAACAGTTTCTGCTTTCTGTGCCGAAGAGAAAGTGATGGAATTATACCAGAAGAAATGTGTAGTACCATTCCAGACAGGAAAAAGGCAGGGTTTAGTCAGTGGAACTGGTTTTGGGTTAGCAATCTTCTTTCTGTTTTGTGTCTATGCAATCAGTTTTTATGCTGGCGCCCAACTTATTGAGAATGGCAAAACTTCGATGTCAGGAGTTTTTCAAGTATTTTTCTCTCTCACAACGGCAGCTGTCGCATTATCTCAATCCGGCTTCATGGCTCCAGGAGCTAGTAAAGCCAAAAGTTCAGCTGCTTCAGTATTTGCTATTCTTGATCAGAAATCAAAAATAGATACCAGTGATGAATCAGGAATGATACTGGAAGATGTGAAGGGAGAGATTGAGTTCCATCATGTCACTTTCAAGTATCCAACCAGACCTGATGTTCATATATTCAAAAATCTTTCCTTGACCATTCATTCAGGACAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGAAATCCAAAAGCTACAGCTTAAATGGTTTAGGCAGCAAATGGGACTGGTAAGCCAAGAGCCTGTGCTGTTTAATGACACCATCAGAGCTAACATTGCCTATGGAAAAGGTGGTAATGCAACTGAGGCTGAAGTTATAGCTGCAGCAGAACTAGCAAATGCTCATAACTTCATTAGTAGTTTGCAGCAGGGGTATGATACAATAGTAGGAGAGCGAGGGATTCAACTTTCTGGAGGACAGAAGCAACGTGTGGCAATTGCAAGAGCCATAGTTAACAGGCCAAGAATATTACTACTAGATGAGGCCACAAGTGCCCTTGATGCAGAGTCTGAAAAAGTGGTTCAAGATGCACTTGATAGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCATAGATTATCAACAATAAAGGGTGCAAATTCAATTGCAGTTGTTAAAAATGGAGTGATTGAAGAGAAAGGAAAACATGACATATTGATCAACAAGGGTGGCACCTATGCTTCTTTAGTAGCATTGCACACAACTAGCACTGCTTCATCTTAA 3888 0.4066 MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMADMQHDSKNNKVKDQSNKTVPFYKLFTFADSWDYLLMFVGTISGVGNGISMPLMTIIIGDAINAFGGNVSTKQVVHQVSKVSVKFAIMGACAFFAAFLQVSCWMITGERQAARIRALYLKAILRQDISFFDKETNSGEVVGRMSGDTVLIQEAMGDKVGKFIQYVSCFLGGLVVAFILGWLLTLVLLSSIPLLVLSGSIMSFAFAMMASRGQTAYSEAATIVEQIIGSIRTVASFTGEKQAISQYNQSLAKAYKVGVQEGLAIGLGLGSVRLFVYCSYALAVWFGGKMVLEKGYTGGEVISVFFAVLTGSLSLGQATSSLTAFSAGQAAAFKMFETIKRKPEIDAYDKIGLKLNDIQGDIELREVCFSYPTRPNELIFNAFSLSISSGTTVALVGQSGSGKSTVINLIERFYDPQDGQIIIDGIDLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDAATDEEIRAAAELANAANFIDKFPLGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHEGKVVEKGTHAELTKNPDGAYSQLIRLQEIKKDSSEQFGDNDSDKLENFVDSGRESSQRSLSRGSSGIGNSSHNSFIASNSMPDTLVGGSEVVPSAKASSTKTRDAPFFLLAYLNKPEIPVLLMGALAATVNGAMLPILGLLISKMINTFFEPADELRKDSKFWALIFVSLSVASFIFHPLRSYSFAVAGSKLIKRIRLMCFEKIIHMEVGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITALVISFQANWQLSLIILVLLPLLLVNGYFQIKAMQGFSTDAKKLYEEASQVANDAVGNIRTVSAFCAEEKVMELYQKKCVVPFQTGKRQGLVSGTGFGLAIFFLFCVYAISFYAGAQLIENGKTSMSGVFQVFFSLTTAAVALSQSGFMAPGASKAKSSAASVFAILDQKSKIDTSDESGMILEDVKGEIEFHHVTFKYPTRPDVHIFKNLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEVIAAAELANAHNFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVNRPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGANSIAVVKNGVIEEKGKHDILINKGGTYASLVALHTTSTASS* 1296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4528 1295 ProSitePatterns ABC transporters family signature. 1190 1204 IPR017871 GO:0005524
Mtr4g4528 1295 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524
Mtr4g4528 1295 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 369 - -
Mtr4g4528 1295 MobiDBLite consensus disorder prediction 659 680 - -
Mtr4g4528 1295 CDD ABC_6TM_Pgp_ABCB1_D2_like 718 1033 - -
Mtr4g4528 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 634 IPR027417 -
Mtr4g4528 1295 CDD ABC_MTABC3_MDL1_MDL2 1050 1285 - -
Mtr4g4528 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g4528 1295 MobiDBLite consensus disorder prediction 639 680 - -
Mtr4g4528 1295 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 49 1291 - -
Mtr4g4528 1295 Gene3D ABC transporter type 1, transmembrane domain 694 903 IPR036640 GO:0005524|GO:0016021
Mtr4g4528 1295 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 729 1015 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g4528 1295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1039 1287 IPR027417 -
Mtr4g4528 1295 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Mtr4g4528 1295 Pfam ABC transporter 1069 1218 IPR003439 GO:0005524
Mtr4g4528 1295 SUPERFAMILY ABC transporter transmembrane region 716 1030 IPR036640 GO:0005524|GO:0016021
Mtr4g4528 1295 SUPERFAMILY ABC transporter transmembrane region 60 378 IPR036640 GO:0005524|GO:0016021
Mtr4g4528 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Mtr4g4528 1295 SMART AAA_5 423 595 IPR003593 -
Mtr4g4528 1295 SMART AAA_5 1077 1271 IPR003593 -
Mtr4g4528 1295 Pfam ABC transporter transmembrane region 728 1000 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g4528 1295 Pfam ABC transporter transmembrane region 73 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g4528 1295 Gene3D - 1040 1289 IPR027417 -
Mtr4g4528 1295 Gene3D - 386 635 IPR027417 -
Mtr4g4528 1295 Gene3D ABC transporter type 1, transmembrane domain 945 1290 IPR036640 GO:0005524|GO:0016021
Mtr4g4528 1295 Gene3D ABC transporter type 1, transmembrane domain 60 646 IPR036640 GO:0005524|GO:0016021
Mtr4g4528 1295 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 49 1291 IPR039421 -
Mtr4g4528 1295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1050 1287 IPR003439 GO:0005524
Mtr4g4528 1295 MobiDBLite consensus disorder prediction 639 658 - -
Mtr4g4528 1295 MobiDBLite consensus disorder prediction 1 29 - -
Mtr4g4528 1295 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g4528 Mtr-Chr4 59333406 59338758 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4528 44 635 Calmodulin-binding Proteins AT2G36910 38.629 2.46e-118 398
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4528 K05658 - gmx:100777713 1931.38