Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr4g4528 | ATGTTGGCCAAGGCTAGCTTGGATGGAGATATTGCTTCAACTGAGATGACAGGGTCAACAAGTCATCATCCACCAGTTCCTGCAGGTGCTGAAAATGTTCAAGAAATGGCTGACATGCAACATGATTCCAAGAATAACAAGGTGAAGGATCAAAGCAATAAGACAGTACCCTTTTACAAGCTTTTCACATTTGCAGACTCATGGGATTATTTGTTGATGTTTGTTGGGACTATAAGTGGCGTTGGGAATGGAATCTCTATGCCTTTAATGACTATAATTATTGGAGATGCTATTAATGCTTTTGGAGGAAATGTTAGCACTAAACAAGTAGTTCATCAAGTTTCCAAGGTGTCTGTCAAGTTTGCAATCATGGGTGCATGTGCCTTTTTTGCAGCGTTTCTACAGGTGTCTTGTTGGATGATCACAGGGGAGAGACAGGCTGCAAGAATAAGGGCATTATACCTCAAAGCAATTTTAAGGCAAGATATCAGTTTCTTTGACAAGGAAACAAATAGTGGTGAGGTTGTTGGAAGAATGTCAGGTGATACAGTTCTTATTCAAGAAGCCATGGGAGACAAGGTAGGAAAATTCATACAATATGTGTCATGTTTTTTAGGAGGTTTAGTTGTGGCATTCATCTTGGGTTGGCTTTTAACCCTTGTCCTTCTATCGTCTATTCCTCTTCTTGTCCTCTCTGGTTCCATAATGAGCTTTGCTTTCGCAATGATGGCATCCCGTGGACAAACGGCATATTCTGAAGCAGCAACTATAGTAGAGCAGATAATCGGTTCAATTCGAACAGTTGCATCATTTACCGGCGAGAAACAAGCTATATCTCAATACAATCAATCCTTAGCTAAAGCTTACAAAGTTGGAGTACAAGAGGGATTGGCTATTGGTTTAGGCCTCGGTTCGGTTCGTTTATTTGTTTACTGCAGTTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGGTACTTGAGAAAGGTTATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCAGTACTAACTGGTTCCTTGTCTCTAGGACAAGCAACTTCGAGCTTAACAGCATTTTCTGCTGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATCAAAAGGAAGCCGGAAATTGATGCTTATGACAAAATCGGGCTAAAGCTTAATGACATTCAGGGAGACATAGAGCTTAGGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTAATATTCAATGCATTTTCTCTTTCGATATCAAGTGGTACTACCGTGGCTTTAGTCGGGCAAAGTGGGAGTGGAAAATCAACAGTGATAAATTTGATAGAGAGATTTTATGATCCACAGGATGGTCAAATTATCATTGACGGTATTGACCTCAGAGAATTTCAATTGAAATGGATCAGACAGAAAATAGGCCTAGTGAGTCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGATGCGGCAACCGATGAAGAAATCCGAGCTGCAGCAGAACTTGCTAATGCTGCTAACTTCATCGATAAATTTCCTCTTGGACTTGAAACGATGGTCGGTGAGCATGGAGCACAACTCTCTGGAGGCCAAAAGCAAAGAATTGCTATAGCAAGAGCAATTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCCCTTGATGCAGAATCTGAAAGAGTAGTACAAGAGACCCTGGACAGAATTATGATAAACCGAACAACCATCATTGTAGCTCACCGCCTAAGCACAATAAGGAACGCTGATATCATTGCTGTTATTCACGAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGAGCTCACTAAAAATCCTGATGGAGCTTATAGTCAACTCATTAGATTGCAAGAAATTAAAAAGGATTCATCAGAACAGTTTGGTGATAATGACTCGGATAAGCTAGAAAACTTTGTAGACTCTGGAAGAGAGTCAAGCCAAAGGTCTTTAAGCCGCGGATCATCAGGGATTGGAAACAGTAGTCACAACTCATTCATAGCATCAAATTCTATGCCAGACACACTAGTAGGAGGGTCTGAAGTTGTTCCTTCAGCAAAAGCATCATCAACTAAAACTCGAGATGCCCCATTTTTTCTCCTTGCTTATCTTAACAAGCCTGAAATCCCGGTGTTACTCATGGGAGCTCTGGCAGCAACAGTAAATGGTGCAATGTTACCTATTCTGGGCCTTCTAATCTCCAAAATGATAAATACATTTTTTGAGCCTGCAGATGAACTTCGTAAAGACTCAAAATTTTGGGCATTAATATTTGTTTCCCTTAGCGTGGCATCTTTCATTTTTCATCCGTTAAGGTCATACTCTTTTGCTGTAGCTGGTTCTAAATTGATAAAAAGAATCCGGTTAATGTGCTTCGAGAAAATAATTCACATGGAAGTAGGATGGTTTGATAAAGCTGAGAATTCAAGTGGTGCGCTTGGTGCAAGGCTGTCAACTGATGCTGCTTCGATTCGAACTTTGGTTGGTGACGCACTCGGTTTGCTTGTTCAAGATATCTCTACAGTTATTACAGCCTTGGTAATTTCCTTTCAGGCAAATTGGCAGCTTTCTCTCATCATTCTTGTTTTGTTGCCTCTACTATTAGTAAATGGATATTTTCAAATCAAGGCCATGCAAGGATTCAGCACAGACGCAAAGAAACTATACGAGGAAGCAAGTCAAGTAGCGAACGACGCAGTAGGGAATATCAGAACAGTTTCTGCTTTCTGTGCCGAAGAGAAAGTGATGGAATTATACCAGAAGAAATGTGTAGTACCATTCCAGACAGGAAAAAGGCAGGGTTTAGTCAGTGGAACTGGTTTTGGGTTAGCAATCTTCTTTCTGTTTTGTGTCTATGCAATCAGTTTTTATGCTGGCGCCCAACTTATTGAGAATGGCAAAACTTCGATGTCAGGAGTTTTTCAAGTATTTTTCTCTCTCACAACGGCAGCTGTCGCATTATCTCAATCCGGCTTCATGGCTCCAGGAGCTAGTAAAGCCAAAAGTTCAGCTGCTTCAGTATTTGCTATTCTTGATCAGAAATCAAAAATAGATACCAGTGATGAATCAGGAATGATACTGGAAGATGTGAAGGGAGAGATTGAGTTCCATCATGTCACTTTCAAGTATCCAACCAGACCTGATGTTCATATATTCAAAAATCTTTCCTTGACCATTCATTCAGGACAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTGTTGCAAAGATTTTATGATCCAGATTCAGGTCAGATTAAACTGGATGGAACAGAAATCCAAAAGCTACAGCTTAAATGGTTTAGGCAGCAAATGGGACTGGTAAGCCAAGAGCCTGTGCTGTTTAATGACACCATCAGAGCTAACATTGCCTATGGAAAAGGTGGTAATGCAACTGAGGCTGAAGTTATAGCTGCAGCAGAACTAGCAAATGCTCATAACTTCATTAGTAGTTTGCAGCAGGGGTATGATACAATAGTAGGAGAGCGAGGGATTCAACTTTCTGGAGGACAGAAGCAACGTGTGGCAATTGCAAGAGCCATAGTTAACAGGCCAAGAATATTACTACTAGATGAGGCCACAAGTGCCCTTGATGCAGAGTCTGAAAAAGTGGTTCAAGATGCACTTGATAGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCATAGATTATCAACAATAAAGGGTGCAAATTCAATTGCAGTTGTTAAAAATGGAGTGATTGAAGAGAAAGGAAAACATGACATATTGATCAACAAGGGTGGCACCTATGCTTCTTTAGTAGCATTGCACACAACTAGCACTGCTTCATCTTAA | 3888 | 0.4066 | MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMADMQHDSKNNKVKDQSNKTVPFYKLFTFADSWDYLLMFVGTISGVGNGISMPLMTIIIGDAINAFGGNVSTKQVVHQVSKVSVKFAIMGACAFFAAFLQVSCWMITGERQAARIRALYLKAILRQDISFFDKETNSGEVVGRMSGDTVLIQEAMGDKVGKFIQYVSCFLGGLVVAFILGWLLTLVLLSSIPLLVLSGSIMSFAFAMMASRGQTAYSEAATIVEQIIGSIRTVASFTGEKQAISQYNQSLAKAYKVGVQEGLAIGLGLGSVRLFVYCSYALAVWFGGKMVLEKGYTGGEVISVFFAVLTGSLSLGQATSSLTAFSAGQAAAFKMFETIKRKPEIDAYDKIGLKLNDIQGDIELREVCFSYPTRPNELIFNAFSLSISSGTTVALVGQSGSGKSTVINLIERFYDPQDGQIIIDGIDLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDAATDEEIRAAAELANAANFIDKFPLGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADIIAVIHEGKVVEKGTHAELTKNPDGAYSQLIRLQEIKKDSSEQFGDNDSDKLENFVDSGRESSQRSLSRGSSGIGNSSHNSFIASNSMPDTLVGGSEVVPSAKASSTKTRDAPFFLLAYLNKPEIPVLLMGALAATVNGAMLPILGLLISKMINTFFEPADELRKDSKFWALIFVSLSVASFIFHPLRSYSFAVAGSKLIKRIRLMCFEKIIHMEVGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITALVISFQANWQLSLIILVLLPLLLVNGYFQIKAMQGFSTDAKKLYEEASQVANDAVGNIRTVSAFCAEEKVMELYQKKCVVPFQTGKRQGLVSGTGFGLAIFFLFCVYAISFYAGAQLIENGKTSMSGVFQVFFSLTTAAVALSQSGFMAPGASKAKSSAASVFAILDQKSKIDTSDESGMILEDVKGEIEFHHVTFKYPTRPDVHIFKNLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEVIAAAELANAHNFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVNRPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGANSIAVVKNGVIEEKGKHDILINKGGTYASLVALHTTSTASS* | 1296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr4g4528 | 1295 | ProSitePatterns | ABC transporters family signature. | 1190 | 1204 | IPR017871 | GO:0005524 | |
Mtr4g4528 | 1295 | ProSitePatterns | ABC transporters family signature. | 535 | 549 | IPR017871 | GO:0005524 | |
Mtr4g4528 | 1295 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 73 | 369 | - | - | |
Mtr4g4528 | 1295 | MobiDBLite | consensus disorder prediction | 659 | 680 | - | - | |
Mtr4g4528 | 1295 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 718 | 1033 | - | - | |
Mtr4g4528 | 1295 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 389 | 634 | IPR027417 | - | |
Mtr4g4528 | 1295 | CDD | ABC_MTABC3_MDL1_MDL2 | 1050 | 1285 | - | - | |
Mtr4g4528 | 1295 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 74 | 361 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr4g4528 | 1295 | MobiDBLite | consensus disorder prediction | 639 | 680 | - | - | |
Mtr4g4528 | 1295 | PANTHER | TRANSPORTER ABC DOMAIN PROTEIN | 49 | 1291 | - | - | |
Mtr4g4528 | 1295 | Gene3D | ABC transporter type 1, transmembrane domain | 694 | 903 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr4g4528 | 1295 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 729 | 1015 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr4g4528 | 1295 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1039 | 1287 | IPR027417 | - | |
Mtr4g4528 | 1295 | Pfam | ABC transporter | 415 | 563 | IPR003439 | GO:0005524 | |
Mtr4g4528 | 1295 | Pfam | ABC transporter | 1069 | 1218 | IPR003439 | GO:0005524 | |
Mtr4g4528 | 1295 | SUPERFAMILY | ABC transporter transmembrane region | 716 | 1030 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr4g4528 | 1295 | SUPERFAMILY | ABC transporter transmembrane region | 60 | 378 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr4g4528 | 1295 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 396 | 632 | IPR003439 | GO:0005524 | |
Mtr4g4528 | 1295 | SMART | AAA_5 | 423 | 595 | IPR003593 | - | |
Mtr4g4528 | 1295 | SMART | AAA_5 | 1077 | 1271 | IPR003593 | - | |
Mtr4g4528 | 1295 | Pfam | ABC transporter transmembrane region | 728 | 1000 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr4g4528 | 1295 | Pfam | ABC transporter transmembrane region | 73 | 347 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr4g4528 | 1295 | Gene3D | - | 1040 | 1289 | IPR027417 | - | |
Mtr4g4528 | 1295 | Gene3D | - | 386 | 635 | IPR027417 | - | |
Mtr4g4528 | 1295 | Gene3D | ABC transporter type 1, transmembrane domain | 945 | 1290 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr4g4528 | 1295 | Gene3D | ABC transporter type 1, transmembrane domain | 60 | 646 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr4g4528 | 1295 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 49 | 1291 | IPR039421 | - | |
Mtr4g4528 | 1295 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1050 | 1287 | IPR003439 | GO:0005524 | |
Mtr4g4528 | 1295 | MobiDBLite | consensus disorder prediction | 639 | 658 | - | - | |
Mtr4g4528 | 1295 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mtr4g4528 | 1295 | CDD | ABC_MTABC3_MDL1_MDL2 | 396 | 634 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr4g4528 | Mtr-Chr4 | 59333406 | 59338758 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr4g4528 | 44 | 635 | Calmodulin-binding Proteins | AT2G36910 | 38.629 | 2.46e-118 | 398 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr4g4528 | K05658 | - | gmx:100777713 | 1931.38 |