Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4519 ATGGTGATATTGAACCTTGGGAAGAAGCAGAATAAGAAGAAGTTGCATAGTGGAGAAGGAGTGAGACTTGGAAAATATGAGTTGGGTAGGATTCTTGGTGAGGGCAATTTTGGTAAAGTTAAGTTTGCTAGGAACACTGATTCTGGACAACCTTATGCTATTAAGATTATTGATAAGAACAAGATCATTGATCTCAATATCACAAACCAGATAAAGAGGGAAATATGTGCCTTGAAGCTCCTAAGGCATCCCAATGTTGTTAAATTATACGAGGTCTTAGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTGACAGGAGAGGAGTTATTTGACAAAATAGCTTCCAAGGGTAAACTTCCTGAAGGTGAAGGTAGAAAATTGTTCCAACAGTTGATTGATGGTGTGAGCTACTGCCACAGTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTTGTGGATGCCAAAGGGAATCTAAAGATAACTGATTTTGGTCTTAGTGCTTTACCCCAACAATTTAGGGCAGATGGGTTGTTGCATACAACATGTGGAAGTGCAAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATAATGGTGCATCATCAGATGTATGGTCATGTGGGGTTATCTTGTATGTAGTCTTAACAGGATTCCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTACCAGAAGGTTTTGAAAGGAGATTTTCAGAAACCAAAATGGTTATCAGCTGGTGCACAAAACATTATAAAGAGGATTCTTGATCCCAACCCTAAAACCAGAATAACAATGGCGGAGATCAAAGAAGATTTGTGGTTCAAGGAAGGATATAATCAAGCATATCATGAGGACGAGGAAGATGGTGTATATGTTGACGATCAAGCCTTTAACATCCATGAATTGTCACATGAAGAAGAAAAGAGTAGTTCACAATCACCAATTCGTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTATCTGAGAGGAAGATAAGGTTTACAGCAAATCTTTCAGCCAAAGTTCTGATGGAGAAAATTGAAGATTCTGTGACAGAAATGGAATTTAGAGTTCAAAAGAAAAATGGCAAAATGAAAGTGATGCAAGAGAACAAGGATCATAAAACTCTTGGCAGCCTCTCAGTGATAATAGAGGTTTTTGAAATAAGTTCATCATTGTATGTAGTAGAGTTAAGGAAGTGTTATGGAGATGCCTCTGTATATAGACAGTTATGCAAGAAGTTATTAAATGATCTCGGTGTTCCCCACGAAAAGCACTAG 1341 0.3818 MVILNLGKKQNKKKLHSGEGVRLGKYELGRILGEGNFGKVKFARNTDSGQPYAIKIIDKNKIIDLNITNQIKREICALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFDKIASKGKLPEGEGRKLFQQLIDGVSYCHSKGVFHRDLKLENVLVDAKGNLKITDFGLSALPQQFRADGLLHTTCGSANYVAPEILANRGYNGASSDVWSCGVILYVVLTGFLPFDDRNLAVLYQKVLKGDFQKPKWLSAGAQNIIKRILDPNPKTRITMAEIKEDLWFKEGYNQAYHEDEEDGVYVDDQAFNIHELSHEEEKSSSQSPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTANLSAKVLMEKIEDSVTEMEFRVQKKNGKMKVMQENKDHKTLGSLSVIIEVFEISSSLYVVELRKCYGDASVYRQLCKKLLNDLGVPHEKH* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4519 446 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Mtr4g4519 446 Pfam NAF domain 323 380 IPR004041 GO:0007165
Mtr4g4519 446 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Mtr4g4519 446 Gene3D Kinase associated domain 1, KA1 318 441 - -
Mtr4g4519 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mtr4g4519 446 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Mtr4g4519 446 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4519 446 PANTHER SERINE/THREONINE KINASE 17 445 - -
Mtr4g4519 446 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4519 446 CDD CIPK_C 325 436 - -
Mtr4g4519 446 Gene3D Transferase(Phosphotransferase) domain 1 106 307 - -
Mtr4g4519 446 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4519 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 445 - -
Mtr4g4519 446 Gene3D Phosphorylase Kinase; domain 1 18 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4519 Mtr-Chr4 59217827 59224672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4519 89 441 CBL-interacting serine-threonine protein kinases AT3G17510 68.927 2.99e-168 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr4g4519 Pkinase 2.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4519 K07198 - gmx:100777468 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4519 4 59217827 59224672 Mtr4g4519 4 59217827 59224672 ECH
Mtr4g4519 4 59217827 59224672 Mtr2g1744 2 19969721 19976164 PCT