Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4513 ATGGGTTGCTTTGGATTCTGCAAAGAGAATGATGCTTATACTACTGCTGACAAAGGAATCTTCATGCAAACCAATCCTAACGGCGGGAACACCAGTTATCATGGCAGACACACTGCAGTAACTGTTCCTCGGCACATAAATCTCCAACCTATTTCTGTTCCTTCTATTACAGTAGATGAACTGAGGTCTTTGACAGATAATTTTGGTACAAAAACTTTCGTTGGTGAAGGTGCATATGGGAAAGTGTATCGTGCCACATTGAAAAATGGACGTGAAGTGGCAATTAAAAAGTTGGATTCCAGTAAGCAACCAGACCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTGTTAATTACTGTGTTGATGGTCCTTTGCGTGCCCTTGCATACGAGTATGCTCCTAATGGATCCCTCCATGATATTCTACATGGACGCAAAGGTGTCAAGGGTGCAGAACCTGGTCAAGTTCTTTCATGGGCTGAAAGAGTTAAAATTGCTGTTGGAGCAGCCAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATAGTCCATCGTTACATTAAATCCAGTAACATACTCCTATTCGAGGACGGCGTTGCAAAGATTGCTGATTTTGATCTGTCAAATCAAGCCCCTGATGCTGCCGCACGTCTTCATTCTACCCGTGTTCTTGGAACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGAAACCTCTCTTCAAAGAGTGATGTTTACAGTTTTGGAGTTATACTGTTGGAACTCTTAACCGGGCGTAAACCTGTTGATCATACACTTCCCCGAGGACAACAAAGCCTTGTGACCTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGATTAAAGGGAGAGTACCCTTCGAAGTCAGTTGCAAAGTTGGCTGCTGTTGCTGCACTGTGTGTTCAATATGAAGCTGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCTCTAATGAATAATACTCGTTCTTCTCAACCAAGGGAACCACGCAACTTGTAA 1089 0.4252 MGCFGFCKENDAYTTADKGIFMQTNPNGGNTSYHGRHTAVTVPRHINLQPISVPSITVDELRSLTDNFGTKTFVGEGAYGKVYRATLKNGREVAIKKLDSSKQPDQEFLSQVSIVSRLKHENVVELVNYCVDGPLRALAYEYAPNGSLHDILHGRKGVKGAEPGQVLSWAERVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDGVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKLAAVAALCVQYEAEFRPNMSIIVKALQPLMNNTRSSQPREPRNL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4513 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Mtr4g4513 362 Gene3D Transferase(Phosphotransferase) domain 1 143 360 - -
Mtr4g4513 362 CDD STKc_IRAK 74 347 - -
Mtr4g4513 362 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
Mtr4g4513 362 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Mtr4g4513 362 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4513 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Mtr4g4513 362 Pfam Protein tyrosine and serine/threonine kinase 73 344 IPR001245 GO:0004672|GO:0006468
Mtr4g4513 362 Gene3D Phosphorylase Kinase; domain 1 32 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4513 Mtr-Chr4 59179918 59183024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4513 49 356 Receptor kinase-like Gene Family AT4G02010 46.894 4.68e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mtr4g4513 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4513 K13436 - gmx:547595 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4513 4 59179918 59183024 Mtr4g4513 4 59179918 59183024 ECH