Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4497 ATGGTTGCCGAAACCGAATTTATATGTCAACAGAGCATTTCTATGTTAAATGTCAAGTATCATCTTTGCGTTACTCAACAACACAACGTCAAGGCTGTGAGTTGCCCTGAGATCATTAAAGATTCCATATTGGAGACCCCTGCAAAGATGTTTCTCCCAAACGTGCATTCTGGTAGCTATACTGATATCGGACCACGGGGATCAATGGATGATGAACACATTCAGATAGATGATCTAGCTTGCCACCTTGGATTTGTGTCCAACTACCCAATGCCAAGTGCGTTTTATGCGGTTTTTGATGGGCATGGAGGGCCTGATGCTGCTGCCTTTGTTAAGAGGAATGCTATGAGATTATTTTTTGAAGATACTGACATGCTTCAATCATATGATACTGATGAGTTTTTTCTAGAGAAGTTGGAGGATTCTCACCGGAGAGCTTTTATACGGGCGGATCTTGCATTGGCTGACGAGCAGAGTGTTAGTAATTCATGTGGGACGACAGCACTGACTGCACTTGTACTCGGAAGGCATTTGCTTGTTGCTAATGCTGGTGACTGTCGAGCAGTTCTTTGTAGGAGAGGTACAGCTGTTGAAATGTCTAAAGATCATAGGCCAAGTTATTTACCAGAACGAAGAAGAGTGGAGGAATTAGGCGGCTTCATTGATGACGGATATCTCAATGGTTATCTCTCAGTAACCCGTGCCCTTGGGGATTGGGACTTAAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCTGAACCTGACGTTCAACTGGTTACATTAACAGAAGAGGATGAGTTCTTGATCATTGCATGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTTGCTGTTAGTTTTGTTCGCCGTGGATTAAGAAGGCACAGCGACCCACAGCAAAGTGCCAGAGATCTAGTCAAGGAAGCATTGCGCCTAAATACATCAGATAATCTTACTGCGATTGTTATATGTTTGTCTCCTGTTGAAAAGTTTGCTGAATCATGTCCGCCCCAAAGGCGAAGATTCAAAGCTTGCAGTATTTCTGAAGAGGCTCGTAATAGACTGAAGAGCTTGATAGAGGGGAATTGA 1092 0.4341 MVAETEFICQQSISMLNVKYHLCVTQQHNVKAVSCPEIIKDSILETPAKMFLPNVHSGSYTDIGPRGSMDDEHIQIDDLACHLGFVSNYPMPSAFYAVFDGHGGPDAAAFVKRNAMRLFFEDTDMLQSYDTDEFFLEKLEDSHRRAFIRADLALADEQSVSNSCGTTALTALVLGRHLLVANAGDCRAVLCRRGTAVEMSKDHRPSYLPERRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGAASPLIAEPDVQLVTLTEEDEFLIIACDGIWDVMSSQVAVSFVRRGLRRHSDPQQSARDLVKEALRLNTSDNLTAIVICLSPVEKFAESCPPQRRRFKACSISEEARNRLKSLIEGN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4497 363 PANTHER PROTEIN PHOSPHATASE 2C 1 350 IPR015655 GO:0004722|GO:0006470
Mtr4g4497 363 SMART PP2C_SIG_2 71 326 IPR001932 -
Mtr4g4497 363 Pfam Protein phosphatase 2C 66 318 IPR001932 -
Mtr4g4497 363 SUPERFAMILY PP2C-like 50 328 IPR036457 -
Mtr4g4497 363 Gene3D - 45 332 IPR036457 -
Mtr4g4497 363 CDD PP2Cc 57 326 IPR001932 -
Mtr4g4497 363 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 350 - -
Mtr4g4497 363 ProSitePatterns PPM-type phosphatase domain signature. 95 103 IPR000222 GO:0043169
Mtr4g4497 363 SMART PP2C_4 46 324 IPR001932 -
Mtr4g4497 363 ProSiteProfiles PPM-type phosphatase domain profile. 56 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4497 Mtr-Chr4 58929198 58931652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4497 1 362 PP2C-type Phosphatase Gene Family AT1G48040 54.663 5.35e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4497 K14803 - gmx:100775577 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4497 4 58929198 58931652 Mtr4g4497 4 58929198 58931652 ECH
Mtr4g4497 4 58929198 58931652 Mtr2g1166 2 12514499 12516939 PCT