Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4489 ATGATTTTGGTGGAAAACTCATTTTCTGACATGAGAATCCTAAGTGATCTCACCCACTCTCTTATTAGCACTATAAAAGTCGCCAATACATTTACATTGGCTTTGGATCCAAATTATTTCATTTTAGTTAGAAAAATGGATGTTTTTCTGTCTGTCCTCCAATTCCTATGTTTCTTTCTTTTAACTATTACCACTTCCTCATTGTTCATTAAAGCATCTGAAATAAATGTTGAAAGCTATGAATCTGATAGAATAATTGATCTACCAGGACAACCTTCAACACCACCAATTTCACACTTTTCAGGTTACATCAATGTCAATGAAGATCATGGGAGGGCTCTTTTCTATTGGTTCTTTGAAGCTCAATCTCAACCCTCCAATAAACCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGAGGTGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTAAAATTTAACCCATACTCTTGGAGTCAAGAAGCAAATCTGTTATTTGTGGAGTCACCCATTGGAGTTGGTTTTTCTTACACCAATACCTCTTCTGATCTCACCATTTTAGAGGATCATTTTGTGGCCGAGGATTCTTACAATTTCTTGGTAAATTGGCTACAAAGATTTCCACAGTTTAAATCCAGGGACTTTTTCTTAGCAGGAGAAAGCTATGCTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGACAGAAACAAAGATAGAAGCAAAAATCCATTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTGATGATTACTATGATTATAAAGGCATTGTAGAATATGCATGGAGTCATGCAGTAATATCAGATGAGCAATATGAGAAAGCAAAACAAGTTTGTGATTTTAAACAATTTCGATGGTCTAATGAGTGCTTTCAGGCCATGGACCAACTCTTCCATGATTATTCAGAAATTGACATATTCAACATTTATGCCCCTGCATGTCGTTTAAATAGTACATCCACAGAAACCAAAAATGGCCCTGAATCACTTAAAAAGGTGAAAAATGGTTATAGAATGAAGAGGATGAGAAGTTTTGGGGGCTATGACCCTTGTTATTCCATATATGCAGAAGAATTTTTTAATAGGGTAGATGTTCAGTTATCTATTCATGCAAACAATAAAAGAGGAAACAGTAAAATAGAATGGAAGGGTTGCAATATTTCCATATTCAATACTTACGACATCTCTGTTTTTTCGGTCCTACCCATCTACACTAAACTCATCAAGGGTGGCCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGATTACCCGTGATAGGGACACGATATTGTGTTGAGGCTTTAGGACTACCTCTAAAGTCTACTTGGAGGATTTGGTACCAACATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTAGTGCCTCTCAACAAACCAACTGAGGCTCTCTCTCTTATTCATTCTTTCCTAACTGGAGATCATCTCCCTACTACTACTAATACACCTCCATGA 1587 0.3749 MILVENSFSDMRILSDLTHSLISTIKVANTFTLALDPNYFILVRKMDVFLSVLQFLCFFLLTITTSSLFIKASEINVESYESDRIIDLPGQPSTPPISHFSGYINVNEDHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGGGAVVEIGPLLVNKNGEGLKFNPYSWSQEANLLFVESPIGVGFSYTNTSSDLTILEDHFVAEDSYNFLVNWLQRFPQFKSRDFFLAGESYAGHYIPQLAELIFDRNKDRSKNPFINLKGFIVGNPETDDYYDYKGIVEYAWSHAVISDEQYEKAKQVCDFKQFRWSNECFQAMDQLFHDYSEIDIFNIYAPACRLNSTSTETKNGPESLKKVKNGYRMKRMRSFGGYDPCYSIYAEEFFNRVDVQLSIHANNKRGNSKIEWKGCNISIFNTYDISVFSVLPIYTKLIKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSTWRIWYQHNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFLTGDHLPTTTNTPP* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4489 528 ProSitePatterns Serine carboxypeptidases, histidine active site. 487 504 IPR033124 GO:0004185
Mtr4g4489 528 Pfam Serine carboxypeptidase 89 516 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 SUPERFAMILY alpha/beta-Hydrolases 85 518 IPR029058 -
Mtr4g4489 528 Gene3D - 374 412 - -
Mtr4g4489 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 PRINTS Carboxypeptidase C serine protease (S10) family signature 487 500 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 Gene3D - 423 517 - -
Mtr4g4489 528 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 57 523 IPR001563 GO:0004185|GO:0006508
Mtr4g4489 528 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Mtr4g4489 528 PANTHER CARBOXYPEPTIDASE 57 523 - -
Mtr4g4489 528 Gene3D alpha/beta hydrolase 79 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4489 Mtr-Chr4 58852951 58858522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4489 398 520 Calmodulin-binding Proteins AT2G22960 31.452 7.34e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4489 K16297 - gmx:100815141 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4489 4 58852951 58858522 Mtr4g4489 4 58852951 58858522 ECH