Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4488 ATGAATGTCTTTCTAGTCCAGATCCTATGTTTCATTCTTTTAACTACTAGTACTACCATTTCATTGTTCATTAAAGCATCTGAAATAAATGTTGAAAGTTATGAAACTGATAGAATAATTGATCTACCAGGACAACCTTCAAACCCATCAATTTCACACTTTTCAGGTTACATCAATGTCAATGAAGAACATGGGAGGGCTCTTTTCTATTGGTTCTTTGAAGCTCAATCTCAACCCTCCAATAAACCTCTCCTTCTTTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGATATGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACCAAAATGGTGAAGGACTAAAATTCAACCCATACTCTTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACACCAATACTTCTTCTGATCTCACTATTTTAGAGGATCATTTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAATTGGTTACAAAGATTTCCACAGTTTAAATCCAGGGACTTTTTCATAGCAGGAGAAAGCTATGCTGGCCACTATATCCCTCAGCTTGCAGAGTTAGTCTTTGACAGAAACAAAGATAGAAACAAATACACCTTAATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTGAAGATTACTATGACAATAAAGGCCTTCTAGAATATGCATGGAGTCATGCAGTGATATCAGATCAGCAATATGAGAAAGCAAAACAAGTTTGTGATTTCAAACAATCTCAATGGTCTAATGAGTGCAATCAGGTCATGAGTGAAGTTTTCCATGATTACTCAGAAATTGATATATACAACATTTATGCACCATCATGTCATTCAAATAGTACATCCTCAGTGACAGTAACAAATAATGTCCCTGAATCATTTTCCAAGGTGAAAAATGATTATAGATTGAAGAGGATGAGAATTTTTGGGGGCTATGATCCTTGTTATTCAACATATGCAGAAGAATTTTTCAACAGGATAGATGTTCAATCATCTTTTCATGCAAATAATATAAGAGAAAACAATAACATAGCATGGAAGGTTTGCAAGGTGGCCTTAAGATATGGATTTACAGATGGCAGACTACCTGTGATAGGGACACGATATTGTGTTGAAGCTTTAGGACTGCCTCTAAAGTCTACTTGGAGATCTTGGTACCATAATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTAGTGCCTCTCAACAAACCAACTGAGGCTCTCTCTCTTATTCATTCTTTCCTAACTGGAGATCATCTCCCTACTACTACTAATACACCTCCATGA 1374 0.3712 MNVFLVQILCFILLTTSTTISLFIKASEINVESYETDRIIDLPGQPSNPSISHFSGYINVNEEHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNQNGEGLKFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDHFVAEDAYNFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELVFDRNKDRNKYTLINLKGFIVGNPETEDYYDNKGLLEYAWSHAVISDQQYEKAKQVCDFKQSQWSNECNQVMSEVFHDYSEIDIYNIYAPSCHSNSTSSVTVTNNVPESFSKVKNDYRLKRMRIFGGYDPCYSTYAEEFFNRIDVQSSFHANNIRENNNIAWKVCKVALRYGFTDGRLPVIGTRYCVEALGLPLKSTWRSWYHNNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFLTGDHLPTTTNTPP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4488 457 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 9 365 - -
Mtr4g4488 457 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 366 451 - -
Mtr4g4488 457 Gene3D alpha/beta hydrolase 31 302 IPR029058 -
Mtr4g4488 457 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Mtr4g4488 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 416 429 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 SUPERFAMILY alpha/beta-Hydrolases 39 447 IPR029058 -
Mtr4g4488 457 Pfam Serine carboxypeptidase 43 367 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 416 433 IPR033124 GO:0004185
Mtr4g4488 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 366 451 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 365 IPR001563 GO:0004185|GO:0006508
Mtr4g4488 457 Gene3D alpha/beta hydrolase 312 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4488 Mtr-Chr4 58845799 58850390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4488 371 449 Calmodulin-binding Proteins AT2G22960 31.250 3.71e-08 51.6