Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4465 ATGACATCACCATCTACTACAATACCAAACATAGTAACAAACACAGACATATCACGTGACACAAGAAGAAAGAAAAGAAAGAACAAGACACAGAAACATCATCAACAAGATCAAATTCAAATCAACCCTAAATGGAAATCCCAAGAACAACAACAAATCTACTCCACCAAGCTCCGTCAAGCCATAACAAGAGTCAACTCATCATCCACCCCGCGCCGAGGAAAAGCCGTTCGAGAAGCCGCTGATAGAGCTCTGGCGGTGACGGCCAGAGGAAGAACTCGTTGGAGCCGGACCATTCTAATGACCCGGCTCAAGATCAAGTTTAGGAAGAAAAAACCTAACAGGGTAACGGCGCTGCCGTCAACTAGGTCAAAGAAGTCAAGGGTCAATGTTTTCCGGTTGAAGGGAAAGGTAGTACCAAGTATGCAAAGGAAAGTAAGGTTTCTTGGAGGGTTGGTTCCTGGTTGCAAAAAGGAACCATTACCGGTGATTCTTGAAGAAGCTATTGATTATATACCTGCACTTGAGATGCAGGTTAGAGCCATGAGTGCTCTTTTTAACCTTCTTTCTGCTTCTACTTCCGGCGCCGGCGTCAGTTCCGGTTGA 606 0.4521 MTSPSTTIPNIVTNTDISRDTRRKKRKNKTQKHHQQDQIQINPKWKSQEQQQIYSTKLRQAITRVNSSSTPRRGKAVREAADRALAVTARGRTRWSRTILMTRLKIKFRKKKPNRVTALPSTRSKKSRVNVFRLKGKVVPSMQRKVRFLGGLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSASTSGAGVSSG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4465 201 MobiDBLite consensus disorder prediction 1 16 - -
Mtr4g4465 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 191 IPR036638 GO:0046983
Mtr4g4465 201 MobiDBLite consensus disorder prediction 1 47 - -
Mtr4g4465 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 201 IPR044660 GO:0006355
Mtr4g4465 201 CDD bHLH_AtIBH1_like 133 185 IPR044549 GO:0006355
Mtr4g4465 201 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 14 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4465 Mtr-Chr4 58628183 58629243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4465 40 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.429 4.04e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4465 - - gmx:100803765 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4465 4 58628183 58629243 Mtr4g4465 4 58628183 58629243 ECH
Mtr4g4465 4 58628183 58629243 Mtr2g1195 2 12985505 12986810 PCT