Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4426 ATGATGATTTCGCTACGAAACCTCTGTAGCTTCTTCACCATCCTCTTAGCAACAATCATACTCACAACGACGTCGTTTACTGATGCACAATCGTGCAACGGTATACTCGTCTCATACTCCTCCTCCACCGGAGTACAACTGCCGCCTAACGTCACCGACCCAAAGAAGCAACCCTACCGATTCGAATCAACCTTAAGCGTGCTAAACAACGGTCTCGATGAACTCAAGTCATGGAAAGTCGCCGTCGAGTTTCAGCACGACGAGTATCTTGTTTCTGCTTCAAATGCTGTTCTCGCTGACGGTACTACCCTCCCTGCCGAAGTTGGAAACGGCACCGTTTTTGCTGGTTTTCCGCAGACGGATCTGAAGACTGCTGTTGAAACAGCTGGTGATTTGACTCAGATGCAGGCTCAGGTCAGTCTTGTTGGGACTGTTTTTGGTGTGGCGCCGCCGGATGTTCCGTTGCCGAAGTCGATCAAGCTTGCTAATGATGGATTCATCTGTCAAAAAACCACCGGTCAAGGTAAGAATGGGACTAATGTTTGTTGCACAAGAGATCCTAAGTTCAAAGCAAACATCACTACAGATGAAAAGTTTCTGCCGCGTCAAAATGGCGATCTTACGATCATGTATGATGTGATTAGATCCTATGATTCAAATTACTGGGCAGAGGTTACGATCGGTAACCAAAATCCTCTCGGAAGGCTTGATAATTGGAGGTTGAGCTGGGACTGGATGAATGACGAGTTTATATTTACAATGAAAGGAGCTTATCCATCTGTTCTGGATGCTTCTGGTTGTATTTTTGGTAAGCAAGGTACATACTACAAGGATCTGGATTTTGCTAATGTATTGAATTGTCAGAGGAGGCCTACCATTATTGATCTTCCTCCTACAAAATTCAATGATACTGATGTTGGGAAAATTCCTTCTTGTTGCCGTAACGGTACTATATTGCCAAAATCTATGGATCCTAGTAAGTCTATTTCGAGATTCCAAATGCAGGTGTACAAAATGCCGCCGGTGCTTAACCGATCCGAGCTTTCACCACCACAGAACTGGAAGATTAGTGGTTCACTTAACCCTGACTACAAATGCGGTCCTCTGGTTCGTGTTAGTCCTACCGAGAATCCAGATCCAACAGGGTTGCCGTTAAACAAAACTGTAATGGCAAGTTGGCAGGTTGTGTGTAACATTACAACAGCCAAGGGAACATCAAGTAAATGCTGTGTCTCATTTTCAGCTTATTACAATGAATCAGTTATTCCTTGCAAAACGTGTGCATGTGGATGCCCCAAGAATACAGCAAGAACATGTAGTACTACTGCACCTGCCATGTGGCTTCCCTCAGATGCTGTCCTTGTTCCTTTTGAGAACCGAACTGCCAAGGCTTATGCGTGGGCAGGGATAAAACATCTACCAACGCCAAACCCACCACCTTGTGGTGATAACTGCGGTGTGAGCATCAACTGGCATTTACTGTCAGATTATAATAAAGGCTGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTACTGCTGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCGTTCAATGCAAGCGCCATAGAAATAGGCGGTGTTAATAATACGATAATAATGCAAGGTTTGGAGGGATTGAACTACCTTGTTGGAGAAACAAATGGAGCTAACCCTCGCACAGATCCTAGGGTGCCTGGGAAACAACAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGAATCAGTGTTGTTCGTGGTGGTGACGGGTTTCCCAAGAAAGTCTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCTGTACTTCCAACCAGTGGTGCTTCCAGGAAGGAATTTTCCTTTGCTACTTTGATGCTTCTACCATTGTTGCTAGTCGTCTTCTTGTTATAG 1947 0.4468 MMISLRNLCSFFTILLATIILTTTSFTDAQSCNGILVSYSSSTGVQLPPNVTDPKKQPYRFESTLSVLNNGLDELKSWKVAVEFQHDEYLVSASNAVLADGTTLPAEVGNGTVFAGFPQTDLKTAVETAGDLTQMQAQVSLVGTVFGVAPPDVPLPKSIKLANDGFICQKTTGQGKNGTNVCCTRDPKFKANITTDEKFLPRQNGDLTIMYDVIRSYDSNYWAEVTIGNQNPLGRLDNWRLSWDWMNDEFIFTMKGAYPSVLDASGCIFGKQGTYYKDLDFANVLNCQRRPTIIDLPPTKFNDTDVGKIPSCCRNGTILPKSMDPSKSISRFQMQVYKMPPVLNRSELSPPQNWKISGSLNPDYKCGPLVRVSPTENPDPTGLPLNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNESVIPCKTCACGCPKNTARTCSTTAPAMWLPSDAVLVPFENRTAKAYAWAGIKHLPTPNPPPCGDNCGVSINWHLLSDYNKGWSARVTLFNWGETNFADWFTAVQMDKAAAGFEKMYSFNASAIEIGGVNNTIIMQGLEGLNYLVGETNGANPRTDPRVPGKQQSVISFTKKTTPGISVVRGGDGFPKKVFFNGEECSLPSVLPTSGASRKEFSFATLMLLPLLLVVFLL* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4426 648 PANTHER COBRA-LIKE PROTEIN 7 8 646 - -
Mtr4g4426 648 Pfam COBRA-like protein 221 400 IPR006918 GO:0010215|GO:0031225
Mtr4g4426 648 PANTHER COBRA-LIKE PROTEIN 7 8 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4426 Mtr-Chr4 58252181 58257359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4426 32 632 COBRA Gene Family AT4G16120 67.828 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4426 - - gmx:100814396 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4426 4 58252181 58257359 Mtr4g4426 4 58252181 58257359 ECH
Mtr4g4426 4 58252181 58257359 Mtr2g1247 2 13497538 13500176 PCT