Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g4418 | ATGACAACCCAATGCTCTCACAGTTTCCTCCTATTATCAATCCTCTTCTTCGCCACCACATTCTCCAATCTCCGTTCAACAACCGCCGACGACGACGCCGAATTCATCCGTTCAAGTTGCAACGCAACACTCTACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTTCAACAGAATCCTGGCCAACTCGCTCGCATCGCCATAGCCGTAAGCTTCTCCAAAGTCCACCGAACTGCCTCTTATCTCTCCAATCTCACTCGCGAAGCAGATTACAGCGGTAGTTCACGCGCCGCACTCGCTCTCCATGACTGTTTCTCAAATCTTGACGATGCTGTTGATGAAATCCGTGGTTCGCTTAAACAGATGCGGCAGATTGGAGCCGCCGGAACTGGCGCCGGTGCCGGAGCAGATTCGTTTCTGTTTCAGATGAGTAACGTGCAGACGTGGATGAGTGCGGCGCTTACTGATGAAGAAACGTGTACGGATGGATTTCAAGATGTAGAAGATTGTCCGGTGAAAGCGGATGTACAGAATCGTGTCTCAAAGGTGAAAAAGTTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCACAAAAAGGAATGCCTTGA | 624 | 0.4952 | MTTQCSHSFLLLSILFFATTFSNLRSTTADDDAEFIRSSCNATLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTREADYSGSSRAALALHDCFSNLDDAVDEIRGSLKQMRQIGAAGTGAGAGADSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPVKADVQNRVSKVKKFTSNALALVNGYAQKGMP* | 208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g4418 | 207 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN | 9 | 204 | - | - | |
| Mtr4g4418 | 207 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 34 | 199 | IPR035513 | - | |
| Mtr4g4418 | 207 | CDD | PMEI-like_3 | 38 | 202 | - | - | |
| Mtr4g4418 | 207 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 5 | 201 | IPR006501 | GO:0004857 | |
| Mtr4g4418 | 207 | Pfam | Plant invertase/pectin methylesterase inhibitor | 35 | 197 | IPR006501 | GO:0004857 | |
| Mtr4g4418 | 207 | SMART | PMEI_2 | 31 | 197 | IPR006501 | GO:0004857 | |
| Mtr4g4418 | 207 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 31 | 201 | IPR035513 | - | |
| Mtr4g4418 | 207 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 204 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr4g4418 | Mtr-Chr4 | 58166586 | 58167629 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr4g4418 | 36 | 207 | Carbohydrate Esterase | AT5G53370 | 27.273 | 3.87e-13 | 65.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g4418 | - | - | cam:101503417 | 305.449 |