Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4407 ATGGTTCATTTCCCATCTTTTGTCAACGGATTGGCAAGAACTATGTCGATCAAGAAAGAGAAGAATTTTCGAAAGGATGATGCAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGAAAGAATGAATTGTTATTGAGTTCCTCTGGAGTTGTTAAGGCCAACAAGGATAATAGTTTTGTTTCTGTTTTTACACATAGAGGCCAAAAAGGAGTCAACCAAGATCGTCTTATTGTTTGGGAGGAATTTGGATGCCAACAAGACATGATGTTTTGTGGAGTTTTTGATGGGCATGGTCCTTGGGGACATTTTGTAGCCAAAAGGGTTAGGAAATTAATACCAGCTATTTTGCTATGCAATTGGCAAAAAAATCTGGCTGCAGCATCAATTGACCTAGATTTAAAGATGGAAGGTGACAAAAATATTCATGGTTTAGACCTATGGAAGCAATCCTACATAAAAACTTTTGCTGCTGTTGACCAAGATTTGAAGCTGCACACTGGGATTGATTCATTTCAAAGTGGCACTACAGCTTTGACAATCATCAAACAGGGTGAAAACCTTATTATAGCAAATGTGGGTGATTCAAGACTTGTGTTAGCAACCACTTCAGAGGATGGTACATTATTTCCACTGCAGCTTACCACTGACTTCAAACCAAATTTACCAAATGAGGCAGAACGCATAAAAGAATCAAAAGGACGTGTATTTTGTATGAAAGATGAACCAGGAGTGTATAGGGTGTGGATGCCAAATGGTAAAACACCAGGATTAGCAATATCTAGAGCCTTTGGTGACTATTGTATGAAGGACTATGGTCTAATCTCAGTGCCAGATGTGACACATAGAAAACTTACCACTGGGGATCAATTTATCATCTTAGCAACAGATGGGGTGTGGGATGTTGTATCCAACGAAGAGGCAGTGAAGATTGTTTGTGCAGCAGCACATAAAGAAAAAGCAGGTGAAAGGCTTGTGAAATATGCCATACGTGAATGGAAAAGAAAGAGAAGTGGTATTGCAATGGATGATATGTCAGCAATTTGTCTCTTCTTTCATCAACTCCCACACACTAAAGCTTTTGATTAA 1089 0.3903 MVHFPSFVNGLARTMSIKKEKNFRKDDARKAVEELAKEARKNELLLSSSGVVKANKDNSFVSVFTHRGQKGVNQDRLIVWEEFGCQQDMMFCGVFDGHGPWGHFVAKRVRKLIPAILLCNWQKNLAAASIDLDLKMEGDKNIHGLDLWKQSYIKTFAAVDQDLKLHTGIDSFQSGTTALTIIKQGENLIIANVGDSRLVLATTSEDGTLFPLQLTTDFKPNLPNEAERIKESKGRVFCMKDEPGVYRVWMPNGKTPGLAISRAFGDYCMKDYGLISVPDVTHRKLTTGDQFIILATDGVWDVVSNEEAVKIVCAAAHKEKAGERLVKYAIREWKRKRSGIAMDDMSAICLFFHQLPHTKAFD* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4407 362 SUPERFAMILY PP2C-like 58 354 IPR036457 -
Mtr4g4407 362 Gene3D - 46 355 IPR036457 -
Mtr4g4407 362 CDD PP2Cc 60 352 IPR001932 -
Mtr4g4407 362 Coils Coil 18 45 - -
Mtr4g4407 362 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Mtr4g4407 362 SMART PP2C_4 51 350 IPR001932 -
Mtr4g4407 362 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 357 - -
Mtr4g4407 362 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Mtr4g4407 362 Pfam Protein phosphatase 2C 83 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4407 Mtr-Chr4 58053835 58056387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4407 1 353 PP2C-type Phosphatase Gene Family AT3G05640 60.000 3.93e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4407 - - gmx:100814087 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4407 4 58053835 58056387 Mtr4g4407 4 58053835 58056387 ECH