Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4404 ATGAATTCCAATTATGGCAAACCAAACCCTCCAAAACAATCCTCTGCTTCCCTCAACAACTTCAATTTCGATCTTGATCTTGGAATCGGATCCAATCGATCCAAATCCCTAAAAGATCAGAAAACCCCAAATCCTCCTTCAAATTCCTATTCAACTCCTTCATATTCATCAGCACAACCCAAAAAATGGACCCACCAACCCGTTCAAACTCCGGCGGGGTTACCCGGTGCACCACCGTCGATGGTCGGTGATATCTTCGGGAAAAGTTGGGGATCAACTCAACCTTCGGGTCCTAGCATTGGTATCGTTAATAAAAACCCTAATTTGTTTGGGGATTTGGTTACCTCTGCATTGGGTCAAGGTTCTTCAAATAATAGCAACGTTCCTCTGAAAAATGCAATTCCCACACCTAAAAATTCATCTTTTTCAATGTCAAACATGTCCAATTCTTTGCCTAAACCTGTTAACACGCTGCAAAGTGGTTCTTCTTTGGGATCATCTTCTGGAAGTGGTTTTAATTTGAATGCCAATAGAAGTCCCAATATTGGAGGTCCTTCAATTCGAAGCGGTGTTGGTGTTGCTGCATCTGGTAGTGGAATTGGAATTAGTTCTAGTAATAAAGATCCTTTTAGTTCATTGGCTGGTTTTGGATCTAAGCCATCTTCTAGTCTTAATTCAGCTGCTAAACCTTCAAAGATTGATTCACAAGATGATGGTTTTGGTGATTTTCAGAATGCTACAAAACCAAGCACCAATGCATTTCCATCAAGTGGTGGTAGTGTTGGAATTGATGTTGATTTTACTGGATCTTCGGCTTTTTCGAATCCAACACCAGTTCAAGCTTCTGGGGGTGATCCAATGGATATGTTTTTCACATCTACCACTCCATCATCTGGAGGTGGTGGTGGTGGAGGTGCGGCGGCATCTTCTGAAATTGATGATTGGGGTAATGAGTTTGGAGGAGGAAACCATGACGTGGGTGGAACAACCACTGAGCTTGATGGGCTTCCACCTCCTCCTGCTGGGATATCAGGTTCTTCTGCTAAAGGCAAAGGGATGGATAATTACAAACAGGGACAATTTGCTGATGCTATTAAATGGCTTTCATGGGCTCTTATTCTTCTAGAGAAAGCTGGGGATGGTGCTGGTACGGTGGAGGTTTTGTCGTGCAGAGCTTCTTGTTATAAAGAAGTTGGAGAGTATAAAAAAGCGGTGGCAGATTGTACCAAGGTTATTGGAAACGATGAAAAAAATGTATCTGTCCTTGTCCAGCGTGCTCTCTTGTATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAACTGTGCTGAAGTTTGATCCTACCAATCGGGTTGCTAGAAGTACTGTTCACCGGTTGGCTAAGATGGCTGAATAG 1404 0.4288 MNSNYGKPNPPKQSSASLNNFNFDLDLGIGSNRSKSLKDQKTPNPPSNSYSTPSYSSAQPKKWTHQPVQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSNNSNVPLKNAIPTPKNSSFSMSNMSNSLPKPVNTLQSGSSLGSSSGSGFNLNANRSPNIGGPSIRSGVGVAASGSGIGISSSNKDPFSSLAGFGSKPSSSLNSAAKPSKIDSQDDGFGDFQNATKPSTNAFPSSGGSVGIDVDFTGSSAFSNPTPVQASGGDPMDMFFTSTTPSSGGGGGGGAAASSEIDDWGNEFGGGNHDVGGTTTELDGLPPPPAGISGSSAKGKGMDNYKQGQFADAIKWLSWALILLEKAGDGAGTVEVLSCRASCYKEVGEYKKAVADCTKVIGNDEKNVSVLVQRALLYESMEKYKLGAEDLRTVLKFDPTNRVARSTVHRLAKMAE* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4404 467 MobiDBLite consensus disorder prediction 121 183 - -
Mtr4g4404 467 PANTHER OS03G0340700 PROTEIN 1 467 - -
Mtr4g4404 467 MobiDBLite consensus disorder prediction 320 350 - -
Mtr4g4404 467 SMART tpr_5 419 452 IPR019734 GO:0005515
Mtr4g4404 467 SMART tpr_5 385 418 IPR019734 GO:0005515
Mtr4g4404 467 SMART tpr_5 345 378 IPR019734 GO:0005515
Mtr4g4404 467 Gene3D Tetratricopeptide repeat domain 345 466 IPR011990 GO:0005515
Mtr4g4404 467 SUPERFAMILY TPR-like 349 457 IPR011990 GO:0005515
Mtr4g4404 467 MobiDBLite consensus disorder prediction 1 97 - -
Mtr4g4404 467 MobiDBLite consensus disorder prediction 213 259 - -
Mtr4g4404 467 MobiDBLite consensus disorder prediction 1 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4404 360 467 Calmodulin-binding Proteins AT3G25230 29.464 2.18e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4404 - - vun:114178472 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4404 4 58036020 58039102 Mtr4g4404 4 58036020 58039102 ECH