Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4383 ATGGAGAACCCTCAATATCCAAACAACCCTCCTCCTTCACCCTATAACCAACGCAGCGCTTCCATTCCCAAGCAACCACCATCGCACCATTCCGATAACAATGATCCAACCACCGCTGAATTACGCGCTCTCGATTGTAACCTCGCTTCCCTCTGCGAGCATGTTCAAATTGAAGGTTTCAATTCCGGCTCTTTCTCCGATATCGTTGTTAATGCAATGGGTTCCACTTATCACCTTCATCGTCTCATCCTCTCCCGCAGTTCTTATTTCAGGAACATGCTTCATGGTCCCTGGAAAGAAGCCAGTGCTGCTATTGTGACCCTGCAAATCGATGATAACAATGTTAATGACGAGGCTATTGCAATTGCTTTGGCATATCTTTATGGGAACCACCCTAAACTTAATGATAACAATGCATTTCGTGTCCTTGCTGCCGCATCCTTTCTTGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATTATATCCGAGCTGTGGACTTCAAACTTTTTGGCTTATCAGGTGTTTGCGGAGAACCAAGATTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTCTGTCAAAGTGGCGGCATGGAGTTGAGAGAGGTGCTTCCTAAACTTTCATCTCATACATTACATGCATTACTGACCTCTAATGATCTGTGGATACCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTCCACACATTCCTGGCAAAAAGTGCTCACTGCAAGGTTGAACATCCTGCACATGGAATTCCTGGTTCTGAGTCTGGAACTGGCATTCATTCTGATAACACGAAGGGAAAAGGTATTGCTGATGGCTGTACTAACAAGATGTTGGAAACTGACTTGGGGAAAATGAGTCTTAAAAGTGATCTAAAGGACACTAGCATGCCTAACCTTTTAGTTGAGCTTGGAGACTCAGAAGGAGACTTCAACAGTGATATTTGTGATTCTAATCAACGGGTTCAACTTGCTTCATATGACATTTCACCAAACTTGAATCCATCGTATCCTAGTGATATGGAAGGACCTTCATTGGGTAATTCATTGTCTGATCCAGACGGGGTAAGAACATCATGTTATGTTGAGGTGCCTCTTGGTGCTGGAACAACTACTGGAGTGGGTATTGAAGGGCCTTCTGAGGAAGGATCCTGCTACCATTCGGATAACAACAATAGGTTGGTCAGAGATCAATCCAGAGATTCTTTTTCATCGAGTTCTTGTAGTGGGCTCACATCCAGTGAATGGGGAAGATATGGAACCCCTTTGCTTTCATGGGGTGGCCATGTAGGCAGAAGACAGGTCAAAGCTCATCCCAGAGGAAACTATAGAGATGAAGACGATGTATTTATTAATATATTTGAAGGGGGCTCACTTTTATATTGCAATATGTCTTTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAGATAGGATTTCCTTGCAAAGCTGTAAATGATGGTCTATGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAGATTGCTGCTGATACATGCAGAGTTTGTTCCCTTATGACTATGTCTTGTACTTGCCATAGGCAGTTTGCATTTTTACATGGATCTACCACCGGATCTTACATACAAGAACATAATCATAACAATATGCCTGGGGGTGGAGGAAATATATATGTTGCTGAATCTTCTACAGGTGAAAGAAATGGCTCTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCTGCAGCGGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTGCCATTTGGCGTTGGCAACAGAAACTACCCTCAGTCTGCAGCCAATGATGATTCAGAAGCACGTGCTGATCACAATGGAGACCTGTCTGGAGATGGATTGACAGCTTTAGTCGGGCTTAGCCAGGGAGGGAATTATGGAACAAATATACATACAGAGCTAACACAAAGGGAACAAGAAATGGGATTGCAAAGTACTGCTGGGGGTGCAAGTACTGGTGGTATTCCCGTACAATTGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGAGAATGACAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCTCCTTTTCGCTTTGGTGTAAGTTTTGAGGAAGTGCACAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTATTCAGGCTTTTAATGATGAAGACCCCCAGGGACGCCGCACCCTTGGATTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATGTGCACAGGAAGGTACATATGTACGTTGACTCGCGTGAAAAGGTGACTGCACGGTATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTGTTCGGAAGCTTTAAACAAACGGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTGTTTGATGAGCTTGCTGATCTTCTACAAAATGGGGCCCTAAGGGTTATTGCTGTAGTGCAGCTTGTTTGA 2592 0.4421 MENPQYPNNPPPSPYNQRSASIPKQPPSHHSDNNDPTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAAIVTLQIDDNNVNDEAIAIALAYLYGNHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELREVLPKLSSHTLHALLTSNDLWIPCEEKRFELAFHTFLAKSAHCKVEHPAHGIPGSESGTGIHSDNTKGKGIADGCTNKMLETDLGKMSLKSDLKDTSMPNLLVELGDSEGDFNSDICDSNQRVQLASYDISPNLNPSYPSDMEGPSLGNSLSDPDGVRTSCYVEVPLGAGTTTGVGIEGPSEEGSCYHSDNNNRLVRDQSRDSFSSSSCSGLTSSEWGRYGTPLLSWGGHVGRRQVKAHPRGNYRDEDDVFINIFEGGSLLYCNMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQEIAADTCRVCSLMTMSCTCHRQFAFLHGSTTGSYIQEHNHNNMPGGGGNIYVAESSTGERNGSFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADHNGDLSGDGLTALVGLSQGGNYGTNIHTELTQREQEMGLQSTAGGASTGGIPVQLLETPEHTIGIEWENDNSSSISLDLKTPLSHFPPFRFGVSFEEVHRLGDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDVHRKVHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4383 863 SMART BTB_4 66 166 IPR000210 GO:0005515
Mtr4g4383 863 Pfam BTB/POZ domain 60 164 IPR000210 GO:0005515
Mtr4g4383 863 SUPERFAMILY POZ domain 60 164 IPR011333 -
Mtr4g4383 863 MobiDBLite consensus disorder prediction 379 399 - -
Mtr4g4383 863 Gene3D Potassium Channel Kv1.1; Chain A 38 199 IPR011333 -
Mtr4g4383 863 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 18 863 - -
Mtr4g4383 863 MobiDBLite consensus disorder prediction 337 362 - -
Mtr4g4383 863 MobiDBLite consensus disorder prediction 1 38 - -
Mtr4g4383 863 MobiDBLite consensus disorder prediction 1 17 - -
Mtr4g4383 863 ProSiteProfiles BTB domain profile. 66 136 IPR000210 GO:0005515
Mtr4g4383 863 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 18 863 - -
Mtr4g4383 863 MobiDBLite consensus disorder prediction 18 38 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr4g4383 BTB 1.1e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4383 - - gmx:100806711 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4383 4 57852855 57859392 Mtr4g4383 4 57852855 57859392 ECH