Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4379 ATGGAGGATTCATCGGAGCAAAATTGGAACAACAGAGAGTTCTCTCTTTTATCGATTTCCGACCTCTCTTCCGATGCCTCTTCTGTTTCACCCGGAATTGCTAGCTTCAAACCCGACCGTCTCCAAATTCAACCAGAATCTCAACAGATTCCTCTCAATTTCGATCTCCAAACTGCCCAGATATTCAAATTGGGTGCTGTTAAATCGGTTTGCATTATGGAAGGCTCGGATGTTGCGAAAACGGCATCGTATTCTACAGGAGTCACCATCGAGTTTAAAAACGAGGAGGAGTGTGAAGCTTTCCATTCTGCAGTCCAACAATGGATAAAGGAAAACAATGTTCAAGGAAACTTACCAAATGGAACTTTAACAACTTCCAAAAGCAAGTTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGCGAACAGGAACTTATTATGCTGCGGTTATTGAGAACCGTGCTGATTTTACTGGCCGTGTAGTAGTTGATGTGGGTGCTGGTAGCGGTATTTTGTCATTATTTGCTGCTCAGGCCGGCGCAAAACATGTGTATGCCGTGGAAGCATCTGAAATGGCAGAATATGCACGCAAACTTATAGCTGGGAACCCAAAACTGGCTCAGCGAATTACAGTGATTAAAGGTAGAGTTGAGGATGTTGAGTTGCCAGAGAAAGCAGATATTCTGATCTCGGAACCCATGGGCACTTTGTTAGTTAACGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACGGATGAATATTTGTTTATTGAAATTGCGAATAAGGCCCTGTTCTGGCAGCAGCAAAACTATTACGGTGTTGATTTGACACCCTTACACGGGACTGCATTTCAAGGATATTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGCTAATAGCTCCCCCAATGTTCCATGTACTAGACTTCGGTAAAATGAAGGAAGAAGAATTGTATGAAATTGACATTCCTCTGAAATTCATTGCCTCTGTGGGCACAAGAGTACATGGGTTAGCATGTTGGTTTGATGTACTATTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACTCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGGCAGGAAATTACCGGCAGGCTTCATTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAGCAAGGAGGGATTCTTCAAACATCTTCTTGTAAGCTTGATCTGAAAGAACCCTACTATAGAATGTCTCAACCACAAGCTTATCCATTAGCCCAAGATCAGCAACCTCAACCACTTGTACAAACACAGGATATACATATACAATCTCAGGAATTGGATGAACCAGAAATAATGCAACAACTTTCGCCTAATTCATGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1605 0.4237 MEDSSEQNWNNREFSLLSISDLSSDASSVSPGIASFKPDRLQIQPESQQIPLNFDLQTAQIFKLGAVKSVCIMEGSDVAKTASYSTGVTIEFKNEEECEAFHSAVQQWIKENNVQGNLPNGTLTTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGRVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFGKMKEEELYEIDIPLKFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLAQDQQPQPLVQTQDIHIQSQELDEPEIMQQLSPNSCAQIDSLMQKI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4379 534 Gene3D - 284 492 - -
Mtr4g4379 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 135 450 IPR025799 GO:0016274|GO:0018216
Mtr4g4379 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 490 IPR025799 GO:0016274|GO:0018216
Mtr4g4379 534 Gene3D Vaccinia Virus protein VP39 121 282 IPR029063 -
Mtr4g4379 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 456 IPR029063 -
Mtr4g4379 534 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 490 - -
Mtr4g4379 534 CDD AdoMet_MTases 181 281 - -
Mtr4g4379 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4379 Mtr-Chr4 57819863 57826694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4379 142 431 C2H2 Transcription Factor Family AT3G12270 34.091 8.79e-39 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4379 4 57819863 57826694 Mtr2g1317 2 14357012 14364769 PCT