Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4374 ATGCTTAGTCCTGAAGGAGAAATTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAGGTATTCCTAATGAGATCACAGACGGCTACAAAACCCTTCCTGAAGTTCGCCGAACAAGTAGTTTCTCTTGTTTGTCAGGTGCGGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATTTGCAATGGTAAGTTAGGAGGAGAAATTCTTCCAAGTTGGGACTCTCCTAATTCGTTTCGTAGAATACCTTCTTCGCCAAGTCTTCCGCGGTTTGATAGACTATCATCTTCTCTCCCAAGTAGTCTCTCATACCTAAGTTGCAGCCCTTCCACTCCAAGTGATATTCTTGAGTACGACTCATTGAAATCCGCAAGTGACCGATCCAGTAGTGACGGTTTTCTTATTGCCAAGGAAGTCCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGATTTAATGGGAGAGATGCAGCTGACTTTCTGGCTGGTACACTTTATGACACCATCATATCTTACCTAGATAGGTTAATTTTGGAATTAGAGCCTGTTTCTATCACTGCTTCCGACCACGCTGATTTGGGTGAATTCCTTCGTTATAAGCTGAGTGATAGTCTTAATTGTCAAGAGGATCATTCACTGTCAAGAACATCACGCGGGTCTTTTTCGCGCAGAGTACTTGATAGTCTAGAAAGTGCTCTCAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAACAGGAAATGGGGGAACGTTTGGATTTAGTTTCGATTGGATCTTGTGTTTTAATTTTGCTTCTTCACGGTAATGATTTGTATACACTTAATCTCGGTGACAGCAGAGCGGTATTGGCGACGTGCAGTAACGGTGACAATATGAACCAGAGTGAGAAACTCAATGCGATACAGCTTACAGATAGTCACACTGTTGAAAATGAAGCTGAAAGAGCTAGACTCCTGGCTGAACATCCTGATGATCATAAGGTCATCATAGCAGGAAAAGTGAAAGGTAAGTTGAAGGTTACTCGTGCATTCGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTGAGAGTTCGCGATCTTACGAGCCCACCATATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCAAATTCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGAAGAAGCGGTGAAGCTTGTAGAGTCTTATATTTTGAACAATTCTTTTGGTGATCCTGCAAGGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCCGACTCTGCAGGTTTCAGCATGGAAGAATTGATGAATGTTCCGGCTGGGAGGAGAAGAAAGTACCACGATGATGTTACTATAATAGTGATCATGCTTGGGATGAATCAGCGCACTTCAAAAGCTTCAACTTGCATGTAA 1503 0.4158 MLSPEGEIKISFGYKCNSDRGIPNEITDGYKTLPEVRRTSSFSCLSGAALSANATLANTNICNGKLGGEILPSWDSPNSFRRIPSSPSLPRFDRLSSSLPSSLSYLSCSPSTPSDILEYDSLKSASDRSSSDGFLIAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLDRLILELEPVSITASDHADLGEFLRYKLSDSLNCQEDHSLSRTSRGSFSRRVLDSLESALSQAENDFLYMVEQEMGERLDLVSIGSCVLILLLHGNDLYTLNLGDSRAVLATCSNGDNMNQSEKLNAIQLTDSHTVENEAERARLLAEHPDDHKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYISTQPSLNVHKISNSDQFVIVGSDGLFDFFSNEEAVKLVESYILNNSFGDPARFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTIIVIMLGMNQRTSKASTCM* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4374 500 Gene3D - 110 496 IPR036457 -
Mtr4g4374 500 PANTHER PROTEIN PHOSPHATASE 2C 2 499 IPR015655 GO:0004722|GO:0006470
Mtr4g4374 500 Pfam Protein phosphatase 2C 248 452 IPR001932 -
Mtr4g4374 500 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 499 - -
Mtr4g4374 500 ProSiteProfiles PPM-type phosphatase domain profile. 135 487 IPR001932 -
Mtr4g4374 500 SUPERFAMILY PP2C-like 148 488 IPR036457 -
Mtr4g4374 500 CDD PP2Cc 147 485 IPR001932 -
Mtr4g4374 500 SMART PP2C_4 123 485 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4374 Mtr-Chr4 57792485 57795550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4374 4 498 PP2C-type Phosphatase Gene Family AT3G16560 64.811 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4374 - - gmx:100808304 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4374 4 57792485 57795550 Mtr2g1320 2 14378767 14383580 PCT