Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4363 ATGATTCACTGCCACCGTCTCAGAGCTCTTCTCAACTCCCCAAAATGTTGTTGTTACCTCCTTCATCTACATCCACGCCGCTCTCTCAACAACCTTTTCTTCTCCACCGCCATTTCAGATTCAGATCAACCATCTTTCACAGTTTCCTACCTCACCAACAATTTCGGCTTATCTTCACAAGATGCTCTCAAAGCATCTAAACGACTTCGTTTCAACACCCCGGATAAACCCGATACTGTTATTGCCTTTTTCAAAACCCATGGTTTCTCCATTGATCAGATACAATCCATCATCCGCAGGGATCCCCTGGTTTTCGTCTCAAACCCCATCAAATCCATTTTGCCAAAGCTTCAATTTTTAGCTTCCAAAGGCGTTTCTCCAGAACACATAATCGTCACTGTTGCCAGAAACCCTCGTTTCCTTCGTGTAAGCCTCAACAAACACATTATCCCTACTTTTGAATTGGTAAGAAGTTTCTGTCCCTCTGATAAGAAAGCTATTGATTGTGTAATTGCATTTCCTGCTACAATTAGTGATGGTCGCATGAAACCCAATTTGAAATTCTTGCTTGATACTGGTGTCACTCGTTCAAGTATTTACCGTTTACTTACTAGCAGACCTTCTGTAATTTTTTCATCTGTTTTGAGGACGGCTGTGGAGGAGATTAAGGAATTAGGGTTTCATCCTTCTAGTTACAATTTTTGTGTCGCATTGTTGGCCAAAAAGGCCATCACTAAATCCCAATGGGATTCCAAAGTCGATGCCTTGAAGAGCTGGGGTTATTCTGAAGATGCAATTTTAACTGCATTTAAAAGAGGGCCTAACCTTATGCTACGGTCTTTGGACAAACTCAATGCGGTGATGCGTTTTTGGATCCAACAACTTGGTTGGGATCCTTTATTGCTCCTGGCAGCACCAGAGCTTTTCGGACTTAGTATAGAGAAAAGGCTTAGTCCAAGGGCTTCAGTTATCCGGTATCTTCTTTCCAAAGGTTTGATGAAGAAGGATGCTAGCTTAACTGCACCATTTTATTTGACTGATGAGGTGTTCCTGCAAAGGTATGTGAATCGTTTTGAGGAGGAAGCATATTGTCTATTAGAGCTATATCGGGGGGAGGATGCTAGCATCTGCTGA 1134 0.4233 MIHCHRLRALLNSPKCCCYLLHLHPRRSLNNLFFSTAISDSDQPSFTVSYLTNNFGLSSQDALKASKRLRFNTPDKPDTVIAFFKTHGFSIDQIQSIIRRDPLVFVSNPIKSILPKLQFLASKGVSPEHIIVTVARNPRFLRVSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPATISDGRMKPNLKFLLDTGVTRSSIYRLLTSRPSVIFSSVLRTAVEEIKELGFHPSSYNFCVALLAKKAITKSQWDSKVDALKSWGYSEDAILTAFKRGPNLMLRSLDKLNAVMRFWIQQLGWDPLLLLAAPELFGLSIEKRLSPRASVIRYLLSKGLMKKDASLTAPFYLTDEVFLQRYVNRFEEEAYCLLELYRGEDASIC* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4363 377 Gene3D Transcription termination factor 3, mitochondrial 177 363 IPR038538 -
Mtr4g4363 377 Gene3D Transcription termination factor 3, mitochondrial 54 176 IPR038538 -
Mtr4g4363 377 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 12 372 - -
Mtr4g4363 377 Pfam mTERF 82 274 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 Pfam mTERF 248 351 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 167 195 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Mtr4g4363 377 PANTHER CGI-12 PROTEIN-RELATED 12 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4363 Mtr-Chr4 57696665 57699332 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr4g4363 mTERF 6.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4363 K15032 - gmx:102666739 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4363 4 57696665 57699332 Mtr2g1331 2 14490927 14494127 PCT