Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4362 ATGCTGAAATTCGTCTCCCACAGTTCCCTGGTTCGTGCCCAGGTCAAGGGTTTTCTTCTCCTATTCACCACAACATCATCATCTACACTTTCTTCTTCTTCTTTCAATTCCAATTTCAATTTCCGCTTCAGTTCCGCTTCAACCACCTCTCACTCTTTCACCGTCTCTTACCTCATCAACAATTACGGTCTCTCCCCTCAAACCGCACTCAATGTTTCTCGCAAGCTCACTCTCTCCGATACCCAAAAACCGGATTCAGTTATCGCCCTCTTCACAACCCATGGCTTCTCCAACACTCAAATTCGTAATATCATCAAAAGGGAACCTTGCTTACTCTTATGCCTCGACCCCAACAAGATACTTTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTACTTCTGATATTGTTCGCATTGTAAATGCTAACCCTAAATTCCTATTAAGAAGTTTGCACAATCATATTATCCCTACTTATGATTTTATTAGAGGGTTTCTTCAATCTGATAAACAAGCCATCACATGTATTAATCGTTATGCTTCTTTTATTTCTGATTCTCGTGTCGAAACTAATGTCAAATTATTGCTTGATAATGGAGCCACACACTCAAATATTGCTACATTGTTGCGTAGTTCTCCTAGGATATATTGTTCATCCAATCTGTTGGAGACTATTCAGGAATTGAAGCAACTAGGTTTCAATTCTTCAACTTCAACTTTTTCTATTGCATTGGTTGCTAAGAGAACTGTGAATGACACTAGGTGGGCTGAGAAAGTTGAAATTTTTAAGAAATGGGGTTGGTCTGATGAAGACATTCTTCAAGCATTTAGGAGGCAACCATACTGTATGTTGTCATCGGCTCAAAAAATCGATGCAGTTTTGAGCGCTTGGGTTGATCAGTTAGGTTTGAATTCTTTGGATCTTGTTAATGCTCCAGGAATCTTTCTATTGAGACTCGAGAAGCGGGTTATTCCAAGGGCTGCAGTTTTGCAGTTCCTTGTATCTAAAGGTTTGAGAAGAAGGGACGCCTCACTAAGTGCACCGTTTGCTGTGACAGAGAAGTTGTTTCTGGACAAATTTGTGAAATGTTTTAAGGAGGATTCTCCTCATTTGTTGAAGTTGTATCAGGAAAAAATGAATCTTGCAAATAGCATGGAGAAGAAGCCTTCATGA 1179 0.3961 MLKFVSHSSLVRAQVKGFLLLFTTTSSSTLSSSSFNSNFNFRFSSASTTSHSFTVSYLINNYGLSPQTALNVSRKLTLSDTQKPDSVIALFTTHGFSNTQIRNIIKREPCLLLCLDPNKILLPKFQFLLSKGASTSDIVRIVNANPKFLLRSLHNHIIPTYDFIRGFLQSDKQAITCINRYASFISDSRVETNVKLLLDNGATHSNIATLLRSSPRIYCSSNLLETIQELKQLGFNSSTSTFSIALVAKRTVNDTRWAEKVEIFKKWGWSDEDILQAFRRQPYCMLSSAQKIDAVLSAWVDQLGLNSLDLVNAPGIFLLRLEKRVIPRAAVLQFLVSKGLRRRDASLSAPFAVTEKLFLDKFVKCFKEDSPHLLKLYQEKMNLANSMEKKPS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4362 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 385 - -
Mtr4g4362 392 Pfam mTERF 255 358 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 Pfam mTERF 89 297 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 SMART mt_12 102 134 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 SMART mt_12 208 236 IPR003690 GO:0003690|GO:0006355
Mtr4g4362 392 Gene3D Transcription termination factor 3, mitochondrial 153 375 IPR038538 -
Mtr4g4362 392 PANTHER CGI-12 PROTEIN-RELATED 30 385 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4362 Mtr-Chr4 57688580 57690104 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr4g4362 mTERF 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4362 K15032 - gmx:102667698 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4362 4 57688580 57690104 Mtr2g1333 2 14508024 14515487 PCT