Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4358 ATGGCCGATCATCAACTTAATGGCGCTCACTATGGCCCTTCCATCCCACCGACGAGACCACAAAGGCGACGCCACAATGCCGGCTGCGGCTTCTGCAGTTGCATCTTGGGCTGCTTTAGAAGCTGTTGCGGATGCATGTTCAACTGCATTTTAAGCCTAATTTGCAGAATCATAGCCACAATCATCATCTTGGTGGCAATATTCGGTTTCCTCTTCTGGCTTATCGTGCGTCCTAACGCCCTCAAGTTCACCGTTATGGAGGCATCACTTACTCAATTCAATTTCACAAATAACAACACACTTCATTATGATCTTTCCGTCAATCTCACAATCAGAAACCCTAATAGAAGAGTTAGTGTCTATTACAATGACATCGAAACACTTTCATTTTATAAAGATTTTAGGTTTGGTTCTCAAACCCTAGGAAAATTCTTTCAACCTCATAAGAATACAAGCCTTTTGAATCCTGTTTTTAAAGGTCAACAAGTGATTCCTTTGAGTTCAAGTCAGATTTCGGAGTTCAATAAGGAGACGAACAATGGGGTTTATGGAATTAATTTGAAGGTTTTGCTTAATGTTAGGTTTGCCTTGGGTTTGATCAAGACAGGGAATCTGAAACAAAACCATCATTGTGATTTGAAGGTTCCTTTCAAGTCACACAATGGAACTTCTTCTTTGGGTAATGGATTTCAAGCCACTCGTTGTGAATGGGATTCCAAATGGTGGTTGTTGTTCCGTTAG 741 0.4103 MADHQLNGAHYGPSIPPTRPQRRRHNAGCGFCSCILGCFRSCCGCMFNCILSLICRIIATIIILVAIFGFLFWLIVRPNALKFTVMEASLTQFNFTNNNTLHYDLSVNLTIRNPNRRVSVYYNDIETLSFYKDFRFGSQTLGKFFQPHKNTSLLNPVFKGQQVIPLSSSQISEFNKETNNGVYGINLKVLLNVRFALGLIKTGNLKQNHHCDLKVPFKSHNGTSSLGNGFQATRCEWDSKWWLLFR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4358 246 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g4358 246 Pfam Late embryogenesis abundant protein 108 202 IPR004864 -
Mtr4g4358 246 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 15 240 - -
Mtr4g4358 246 PANTHER OS05G0367900 PROTEIN 15 240 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4358 Mtr-Chr4 57633371 57634259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4358 75 228 SNARE and Associated Proteins AT1G32270 33.766 4.35e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4358 - - aprc:113873272 277.715