Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4351 ATGGAAGAATCAACTTCCGATAACAACGACCGTAAAAAAATCCGCAACATATGCATCTTGGCACATGTCGACCACGGCAAGACAACGCTCGCGGACCAGCTTATCGCGGCGGCGAGTGGCGGCATGGTTCATCCAAAGGTAGCCGGTAAAGTCCGTTTCATGGATTACCTCGATGAAGAACAACGTCGAGCTATAACAATGAAGAGTTCTTCAATTTCGCTTCACTACAATCACCATACTGTTAATCTCATAGATTCCCCTGGTCATATCGATTTCTGCGGAGAAGTTTCCACCGCCGCGCGTCTTTCTGATGGTGCGCTTCTTCTTGTTGATGCTGTTGAAGGTGTTCATATTCAAACTCATGCTGTTCTTCGTCAATGCTGGACTGAAATGCTTGAACCGTGTCTTGTGTTGAATAAGATGGATAGGTTGATCACTGAATTGAATCTCACTCCTTTGGAAGCTTATACACGTCTTTTGAGAATTGTTCATGAGGTTAATGGGATTTGGAGTGCTTATAATTCGGAGAAATATTTATCTGATGTGGATGCTCTTCTTGCCGGTGGGACTGCTGCTGGAGGTGAAGTTATGGAGGATTATGACGATGTTGAAGACAAGTTTCAGCCTCAGAAAGGGAATGTCGTGTTTGCTTGTGCTTTGGATGGTTGGGGTTTTGGGATTCATGAATTTGCTGAGATTTATGCTTCAAAGCTTGGTGGTAGTGCTAGTGTGGGTGCATTGCTGAGGGCTTTGTGGGGTCCATGGTATTATAATCCGAAGACGAAGATGATTGTTGGAAAGAAAGGGATTAGTGGTAGTAAGGCTAGGCCTATGTTTGTTCAGTTTGTGTTGGAGCCTTTGTGGCAGGTTTATCAAGGAGCACTTGGTGGGGGTAAAGGGATGGTTGAGAAGGTTATTAAGTCTTTTAATTTGCAGATTCAGGCGCGTGAGTTGCAGAATAAGGATTCTAAGGTTGTGCTTCAAGCTGTCATGAGTCGTTGGCTTCCTCTTTCAGATGCCATTTTGTCTATGGTATTGAAGTGTCTTCCGGATCCTGTGGAAGGGCAGAAGTCTCGGATATCACGGCTGATTCCGGAGCGCAAGGTTGGTTCTGAGAATGGGGTTGATAGGAGGGTGGTGGAAGAGTCTGAGCTCGTGAGGAAGTCGGTGGTGGAGTGTGATTGTAGGGATGAGGCGCCTTGTGTTGCCTTTGTGGCAAAAATGTTTGCTCTTCCTGTTAAAATGCTTCCTCCTCTTCAACCGGGGGAGGGGAGTTTTGGCGAGGAAGGTGAGGGTGAATTTGATGAGTGTTTTTTGGCATTTGCTAGAATATTTAGTGGTGTTTTGTCTGTTGGGCAGAGAGTTTTTGTGATTTCGGCTTTGTATGATCCTTTGAAAGGGGAATCAATGCAAAAGCACATTCAAGAGGCTGAATTGAAATCCATGTATCTGATGATGGGTCAAGGGTTGAAAGTAGTGAAATCTGCAAAAGCAGGAGATGTTGTTGCGATCCGAGGACTTGGGCAGTATATTTTGAAAAGTGCTACACTTTCTTCTACTAGGAATTGTTGGCCATTTTCGAGTATGGCGTTTCAAGTTGCCCCAATTTTGAGGGTTGCTATTGAGCCATCTGACCCTGCAGATATGGGTGCACTGCTCAAAGGCTTGAGGCTTTTGAATCGAGCGGATCCGTTTGTTGAGGTTACGGTTTCTGCTAGAGGAGAACATGTTCTTGCCGCAGCTGGTGAAGTTCATCTCGAGAGATGCATAAAGGATTTGAAGGATAGGTTTGCAAAAGTAAGCTTGGAAGTCTCTCCACCCCTTGTATCCTACAAAGAGACCATTGAGGGAGAGGTATCCAACATGCTGCAAAATTTGAAAGTTCTTAGCAAGAACTTAGATTATGTTGAGAAAACGACGCCCAATGGAAGATGCGTTGTACGCGTGCAGGTGATGAAACTTCTACCTTCTCTCACAAAGGTGCTTGATGAAAGCGCCAATTTACTTGGAGATATCATTGGAATTAAGTCGGAGCATACAGTTAAAAGTATGGAAATGCAGAGAACAAATATTCTCGAAAAGGAGAATCCAGCTGAAGTGATTAAAAAACGTATAATGGATGCAATTGAGAGTGACATTTTGTGTAGGATTGAGAATGATGAAGACCATGCTGAGAAATGTAGATTGAAGTGGTTAAAGCTTTTGAGAAGGATATGGGCTCTTGGACCGAGTTACATCGGCCCTAACGTTCTTTTCACTCCTGATATTAAAGCAGAAAGTACCGATAGCTCTGTTCTAATACGTGGTTCTTCTCAACTATCTGAAAAGTTGGGTTTTGTTGCTGATTCTGGTAACAGTAACTCGGTTTCGGAGGCATCTTCAAATGAGAGCCAAGTGTTGTATATGGATGCCGAGCGTCTTGAGAGTAATGTTATAACCGGGTTCCAACTAGCAACTTCAGCTGGGCCTTTATGCGATGAACCTATGTGGGGTTTGGCATTTGTCATCGAGGCACGTATATCTCCATCTACAGGGCATCATGATGAATCCGAAACACACCAACAATCCGATCAGTATGGCATCTTTGCAGGGCAGGTTATTGCAACCGTCAAAGATGCTTGTAGGGAAGCTGTGCTAAAGAATAAGCCAAGACTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACCACTACTGAATATTTGGGTCCCATGTATGGTGTACTTTCCCGAAGACGGGCTCGAATTTTGAAAGAAGAGATGCAGGAAGGTTCCCCTTTATTCACTGTGCATGCATATGTTCCTGTTTCTGAGAGTTTTGGTTTTACTGATGAGCTTAGAAGTCGGACTTCTGGTGCCGCAAGTGCACTTCTTGCCCTTAGCCATTGGGAAGCACTACATGAGGATCCTTTCTTTGTACCTAAAACAGAAGAGGAAATCGAAGAGTTTGGAGATGGTTCCAGCGTTCTTCCAAATACAGCAAGAAAATTGATTGACGCAGTCAGACGGCGGAAGGGCCTTCCTGTGGAGGAAAAGGTAGTACAACATGGAACAAAGCAGAGGACACTCGCTCGTAAAGTTTGA 3081 0.443 MEESTSDNNDRKKIRNICILAHVDHGKTTLADQLIAAASGGMVHPKVAGKVRFMDYLDEEQRRAITMKSSSISLHYNHHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWTEMLEPCLVLNKMDRLITELNLTPLEAYTRLLRIVHEVNGIWSAYNSEKYLSDVDALLAGGTAAGGEVMEDYDDVEDKFQPQKGNVVFACALDGWGFGIHEFAEIYASKLGGSASVGALLRALWGPWYYNPKTKMIVGKKGISGSKARPMFVQFVLEPLWQVYQGALGGGKGMVEKVIKSFNLQIQARELQNKDSKVVLQAVMSRWLPLSDAILSMVLKCLPDPVEGQKSRISRLIPERKVGSENGVDRRVVEESELVRKSVVECDCRDEAPCVAFVAKMFALPVKMLPPLQPGEGSFGEEGEGEFDECFLAFARIFSGVLSVGQRVFVISALYDPLKGESMQKHIQEAELKSMYLMMGQGLKVVKSAKAGDVVAIRGLGQYILKSATLSSTRNCWPFSSMAFQVAPILRVAIEPSDPADMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGEVSNMLQNLKVLSKNLDYVEKTTPNGRCVVRVQVMKLLPSLTKVLDESANLLGDIIGIKSEHTVKSMEMQRTNILEKENPAEVIKKRIMDAIESDILCRIENDEDHAEKCRLKWLKLLRRIWALGPSYIGPNVLFTPDIKAESTDSSVLIRGSSQLSEKLGFVADSGNSNSVSEASSNESQVLYMDAERLESNVITGFQLATSAGPLCDEPMWGLAFVIEARISPSTGHHDESETHQQSDQYGIFAGQVIATVKDACREAVLKNKPRLVEAMYFCELNTTTEYLGPMYGVLSRRRARILKEEMQEGSPLFTVHAYVPVSESFGFTDELRSRTSGAASALLALSHWEALHEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4351 1026 Coils Coil 612 632 - -
Mtr4g4351 1026 TIGRFAM small_GTP: small GTP-binding protein domain 13 143 IPR005225 GO:0005525
Mtr4g4351 1026 Pfam Elongation factor Tu domain 2 439 517 IPR004161 GO:0005525
Mtr4g4351 1026 CDD EF2_II 400 520 - -
Mtr4g4351 1026 PRINTS GTP-binding elongation factor signature 16 29 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 PRINTS GTP-binding elongation factor signature 62 70 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 PRINTS GTP-binding elongation factor signature 82 92 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 PRINTS GTP-binding elongation factor signature 98 109 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 PRINTS GTP-binding elongation factor signature 134 143 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 SMART EFG_C_a 884 973 IPR000640 -
Mtr4g4351 1026 CDD EF2 15 235 - -
Mtr4g4351 1026 Gene3D Yeast translation eEF2 (G' domain) 227 335 - -
Mtr4g4351 1026 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 9 1025 - -
Mtr4g4351 1026 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 9 1025 - -
Mtr4g4351 1026 Gene3D - 883 1017 - -
Mtr4g4351 1026 SUPERFAMILY Translation proteins 393 529 IPR009000 -
Mtr4g4351 1026 SUPERFAMILY Ribosomal protein S5 domain 2-like 609 886 IPR020568 -
Mtr4g4351 1026 Pfam Elongation factor Tu GTP binding domain 12 252 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 CDD EF2_snRNP_III 535 606 - -
Mtr4g4351 1026 CDD eEF2_snRNP_like_C 887 965 - -
Mtr4g4351 1026 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 12 243 IPR000795 GO:0003924|GO:0005525
Mtr4g4351 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 350 IPR027417 -
Mtr4g4351 1026 SUPERFAMILY EF-G C-terminal domain-like 533 607 IPR035647 -
Mtr4g4351 1026 Pfam Elongation factor G C-terminus 885 969 IPR000640 -
Mtr4g4351 1026 Gene3D Elongation Factor G (Translational Gtpase), domain 3 534 610 - -
Mtr4g4351 1026 CDD aeEF2_snRNP_like_IV 606 891 - -
Mtr4g4351 1026 SUPERFAMILY EF-G C-terminal domain-like 887 985 IPR035647 -
Mtr4g4351 1026 Gene3D - 5 208 IPR027417 -
Mtr4g4351 1026 Gene3D - 631 881 IPR014721 -
Mtr4g4351 1026 Gene3D Translation factors 352 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4351 Mtr-Chr4 57551282 57554672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4351 7 1026 Eukaryotic Initiation Factors Gene Family AT3G22980 68.309 0.0 1411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4351 K14536 - pvu:PHAVU_003G003900g 1604.34