Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4346 ATGGCAGAATCACTCCTCTTTGGCGTGGCAGAGTCATTCATTGGAAAACTTGCATCCGTTGCTGTTCAAGAAGCTTCTCTATCCCTCAGCGTCTACAAGGATCTTCAAGAAATCAAAAAAACTGTCTCACTTGTCAAAGCCGTGTTGTTGGACGCTGAACAAAAGCAATGGCAGAACAATGAGCTACGTGAATGGTTGAAACAGATTAAGCGCGTCTTCTACGATGCCGAAGATGTTATAGATGATTTCGAATGTGAGGCCTTGCGAAAGCACGTCATCAACACTTCAGGTAGCATCAGAAGGAAGGTAAAATGTTTCTTCTCAAATTCTAATCCTCTTGTTTATCGCTTTCAAATGGCACACCAAATCAAACACATCAAAGAGAGATTTGATAAGGTTGCTGCTGATAGGCTTAAGTTTGGCCTTCAAATCAATGATAGTGATAATCGTGTTGTAAAAAGGCGCGAATTGACACATTCATATGTGATTGGTTCTGATGTGATAGGAAGGGAACATGATAAACAAAAAATCATTGATATGTTATTGCAAGATAGCGGTGATAGTAATAGTCTCTCTGTTATTCCTGTTGTTGGAATTGGAGGATTAGGAAAGACTACACTTGCAAAGGCAGTGTTTAATGATAAGAGTTTAGATGAGACTTTTCCATTGAAGATGTGGGTGTGTGTCTCTGATGATTTTGAACTTAAGAATCTGCTTGTTAAAATCCTCAATGCAGCTAGTGTTAGTGGTTCTTCTGCTGATCCTAACCCAATTCACCAAGAGAGCTTTACAAACCTTGATTTGGAGCAGCTACAAAATCGTCTAAGGAACGTGATTGCTGGTAAAAAGTTCTTACTCGTCTTGGACGATGTATGGAATGAGGATCGTGTCAAATGGGTTGAGTTGAAGTATTTAATACAAGTAGGCGCTGAAGAAAGTAAAGTCTTGGTGACTACACGTAGCCACTCAATTGCCAAAATGATGGGCACCAACACATCATACATTTTGGAAGGTCTTTCTCTAGAGGATTCCTTATCTGTGTTTGTCAAATGGGCTTTTAAAGAGGAAGAAGAGAAAAAATATCCAGAATTGGTGGAGATTGGGAAAGAAATTGTACAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATTAGGGAGTTCTCTATTCTTAAAATTTGATGTTGAAGAGTGGAAGTTTATCAGAGACAGTGAGATTTGGAATTTACCACAAAAAGAAGATGACATTTTGCCTGGTCTCAAATTAAGTTATGATCAGTTACCTTCTTATTTAAAACAATGTTTTGCTTGCTTCTCTCTCTTTGAAAAGAACTTTGATTTTTCTAATTTTCATGTTAGTGTGCTATGGGTGGCACTTGGTTTTCTTCCGCCACCAAGTAGGGGTAAAACCTTGGAAGATATGAACATTCAGTTTGTGTACGAGCTTCAGTCTAGATCATTTCTTCAAAATTTTAGAGACTTTGGTGGTGGTTTTTGTGGTTTTAAATTGCATGATTTGGTGCATGATCTTTCATTGTATGTTGCAAGAGATGAGTTTCAATTGTTGAAATTTCATAATGAAAATATACTCGAGAATGTCCTTCATCTGTCATTTCTTAAAAATGATTTGCTTGGCCTAACGCCGGTTCCTACTGGCCTGAGAACCTTGATATTTCCTAAGGGAGCCAACAATGAAGCTTTCTTGAAAACTTTGGTGTCAAGGTGCAAATTCTTGCGTGTTTTACAGTTACCTGATTCTACATACGAGAGTTTGCCCCGCTCTATTGGCAAATTAAAACATTTAAGATATCTCAATCTTGGAAAAAGCAAAGAATTGAAGAGCCTTCCTGACTCATTGTGCAAACTCCAGAATCTATACACTTTGAAACTCAATGGTTGCATAAAGCTTAAAAAATTACCCAATGGAATAGGAAATTTGATAAGCCTTCGGCAGCTAATCATAACTACAAAGCAATATACTTTACCAGAAAAAGAGATTGCAAAGTTGACTTGTTTAGAAATTTTATCTGTCAATTCTTGTGACAATCTAGAGACGTTGTTGCTTGAAGGGATACAACTTTCTAACCTAAAGTGGTTGGGTATTTCTTCTTGTGGAAATCTAAAGTCTATGCCACTTCACGTTATTCCCAACTTAGAGTGGTTGTTCATTACTAATTGCCATAAGTTGAAATTTTCATTTCACAATGAGAACCAAATCCCAAAGTTAAAGCTGAAGTTGCTAAGTCTTGAATCTTTGCCACAACTTGTGAGTTTTCCTGAATGGTTGAAAGGATGTGCCGACACATTAAACACCTTGGTAATTGATGGCTGTGAAAATCTTGATGAGCTTCCTGAGTGGTTATCAACTATGATTTGTTTCAATAGATTTGTAGTTATAAATTGCCCAAAATTGCTTTCGCTCCCCGATTGCTTTTCAAACCTTGAAAGTTTATTAATTGTAGATTGTCCAGAATTATGTAGAAGATACCAGCCTGAAGTCGGACATGATTGGCACAAGATATCACACATCAAACAAGTGAATGTTTTTTTCTTAAGGAGTCAAACAAGTGAAGGTTGA 2577 0.3741 MAESLLFGVAESFIGKLASVAVQEASLSLSVYKDLQEIKKTVSLVKAVLLDAEQKQWQNNELREWLKQIKRVFYDAEDVIDDFECEALRKHVINTSGSIRRKVKCFFSNSNPLVYRFQMAHQIKHIKERFDKVAADRLKFGLQINDSDNRVVKRRELTHSYVIGSDVIGREHDKQKIIDMLLQDSGDSNSLSVIPVVGIGGLGKTTLAKAVFNDKSLDETFPLKMWVCVSDDFELKNLLVKILNAASVSGSSADPNPIHQESFTNLDLEQLQNRLRNVIAGKKFLLVLDDVWNEDRVKWVELKYLIQVGAEESKVLVTTRSHSIAKMMGTNTSYILEGLSLEDSLSVFVKWAFKEEEEKKYPELVEIGKEIVQKCGGLPLALRTLGSSLFLKFDVEEWKFIRDSEIWNLPQKEDDILPGLKLSYDQLPSYLKQCFACFSLFEKNFDFSNFHVSVLWVALGFLPPPSRGKTLEDMNIQFVYELQSRSFLQNFRDFGGGFCGFKLHDLVHDLSLYVARDEFQLLKFHNENILENVLHLSFLKNDLLGLTPVPTGLRTLIFPKGANNEAFLKTLVSRCKFLRVLQLPDSTYESLPRSIGKLKHLRYLNLGKSKELKSLPDSLCKLQNLYTLKLNGCIKLKKLPNGIGNLISLRQLIITTKQYTLPEKEIAKLTCLEILSVNSCDNLETLLLEGIQLSNLKWLGISSCGNLKSMPLHVIPNLEWLFITNCHKLKFSFHNENQIPKLKLKLLSLESLPQLVSFPEWLKGCADTLNTLVIDGCENLDELPEWLSTMICFNRFVVINCPKLLSLPDCFSNLESLLIVDCPELCRRYQPEVGHDWHKISHIKQVNVFFLRSQTSEG* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4346 858 PRINTS Disease resistance protein signature 193 208 - -
Mtr4g4346 858 PRINTS Disease resistance protein signature 278 292 - -
Mtr4g4346 858 PRINTS Disease resistance protein signature 375 389 - -
Mtr4g4346 858 PRINTS Disease resistance protein signature 691 707 - -
Mtr4g4346 858 CDD RX-CC_like 8 129 IPR038005 -
Mtr4g4346 858 PANTHER DISEASE RESISTANCE PROTEIN RP 27 828 IPR044974 GO:0006952
Mtr4g4346 858 Gene3D - 338 423 IPR042197 -
Mtr4g4346 858 Gene3D - 149 336 IPR027417 -
Mtr4g4346 858 Gene3D Ribonuclease Inhibitor 532 739 IPR032675 -
Mtr4g4346 858 Gene3D Ribonuclease Inhibitor 740 833 IPR032675 -
Mtr4g4346 858 Pfam NB-ARC domain 171 403 IPR002182 GO:0043531
Mtr4g4346 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 437 IPR027417 -
Mtr4g4346 858 PANTHER OS08G0543100 PROTEIN 27 828 - -
Mtr4g4346 858 Pfam Rx N-terminal domain 11 98 IPR041118 -
Mtr4g4346 858 Gene3D - 424 512 IPR036388 -
Mtr4g4346 858 Gene3D - 10 124 - -
Mtr4g4346 858 SUPERFAMILY L domain-like 491 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4346 Mtr-Chr4 57490578 57493411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4346 578 682 WRKY Transcription Factor Family AT4G12020 34.906 1.10e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4346 - - mtr:MTR_7g078640 1168.68