Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4345 ATGGCGGAATCACTACTCTTCGGAGTTGCAGAGTCATTCATTAGTAAGCTTGCTTCTGTTGCTGTCAATGAAGCTTCTCTAGCGGGGCTGGGTGTCTATGACGATCTTTAAGAAATAAAAAACATTGTCTCACTCGTCAAAGCCGTGTTATTAGATGCTGAACAAAAGCAATGGCAGAACAATGAGCTACGTGAATGGCTGAAACAGATTAACCGTGTTTTCTACGATGCCGAAGATGTTATAGATGATTTCGAATGTGAGGCCTTGCGAAAGCACGTCATCAACACTTCTGGTAGCATCAGAAGGAAGGTAAAATGTTTCTTCTCAAATTCTAATCCTCTTGTTTATCGCTTTCAAATGGCACATCAAATCAAACATATCAAAGAAAGATTTGATAAGTTTGCTGCTGATAGGCTTAAGTTTGGCCTTCAAATCAATGATAGTGATAATCGTGTTGTAAAAAGGCGCGAATTGACACATTCATATGTGATTGATTCTGATGTGATAGGAAGAAAACATGATAAACAAAAAATCATTAATCTGTTATTGCAAGATAGTGGTGATAGTAATAGTCTCTCTGTTATTCCTATTGTTGGAATTGGAGGATTAGGAAAAACTACACTTGCAAAGGTCGTGTTTAATGATAAGAGTTTAGATGAGACTTTTCCATTGAAGATGTGGGTGTGTGTCTCTGATGATTTTGAACTTGAGAATCTGCTTGTTAAAATCCTCAATTCAGCTAGTGTTAGTGGTTCTGCTCTTGGTCCTAACCCAATTCACCAAGAGAACTATACAAACCTTGATTTGAATCAGCTACAAAATCATCTGAGAAATGTGATTCCTGGTAAAAAGTTCTTACTCGTCTTGGACGATGTATGGAATGAGGATCGTGTCAAATGGGTTGAGTTGAAGAATTTAATACAAGTAGGTGCTGAAGGAAGTAAACTCCACTCAATTGCCAAAATGATGGGCATCAACACATCATACATTTTGGAATTGGAGGGTCTTTTTAGAGAGGATTCCTTGTCTGTATTTGTCAAATGGGCTTTTGAAGAGGGAGAAGAGAAGAACTATCCAAAATTGATGGAGATTGGGAAAGAAATTGTACAAAAATGTGGAGGGCTTCCTTTGGCCCTAAGAACATTGGGGAGTTCTCTATTCTTAAAAGATGATATAGAAGAGTGGAAGTTTAACAGGGACAGTGAAATTTGGGATTTACCACAAAAAGATGACGACATTTTGTCTGCTATCAAAAGTTATGATCAGTTACCTTCTTATTTAAAACAATGTTTTGCTTGCTTCTCTCTCTTTGAAAAGTACTTTCCATTTATTAATTTTGATGTTAGTGTGCTATGGGTGGCATTTGGTTTTCTTCCACCACCAAACATGGGTAAAACCTTGGAAGATATTAGCATTCAGTTTCTGTACGACCTTCAGTCTAGATCATTTATTCAAGATTTTGTAGACTTTGGTGGTGGTTTTTGTGGATTTAAATTGCATGATTTAGTGCATGATCTCTCATTGTATGTTGCAAGAGATGAGTTTCAATTGTTGAAATTTCATGATGAAAATATATTCGAGAATGTCCTTCATTTGTCATTTATTAAAAATGATTTGCTTGGCCTAACACGAGTTCCTACAGGTCTGAGAACCATGCTATTTCCCAAGGGAGCTAACAATGAAGCTTTCTTGAAAACATTGGCGTCAAGGTTCAAATTCTTGCGTGTTTTACGGTTAGCTCATTCTAAATATGAGAGTTTTCCCCGCTCTATTTGAAAATTAAAACATTTAAGATATCTCAATCTTGAGAATAATAAAGAATTGAAGAGCCTCCCTAATTCAGTGTGCAAACTCCAGAATCTGCATACTTATCTCGATGGTTGCATAAAGCTTCAAACATTACCCAATGGAATAGGAAATTTGATCAGCCTTCGGCAGCTCTATATAACTACACATCAATCTACTTTCCCAGACAAAGAGATTGCAAAGTTGTCATCTTTAGAATGTTTATCCGTCGTATCTTGTGACAATCTAGAGGCTTTGTTTCTTGAAGGAATACATACAACTTTCTAA 2073 0.3661 MAESLLFGVAESFISKLASVAVNEASLAGLGVYDDL*EIKNIVSLVKAVLLDAEQKQWQNNELREWLKQINRVFYDAEDVIDDFECEALRKHVINTSGSIRRKVKCFFSNSNPLVYRFQMAHQIKHIKERFDKFAADRLKFGLQINDSDNRVVKRRELTHSYVIDSDVIGRKHDKQKIINLLLQDSGDSNSLSVIPIVGIGGLGKTTLAKVVFNDKSLDETFPLKMWVCVSDDFELENLLVKILNSASVSGSALGPNPIHQENYTNLDLNQLQNHLRNVIPGKKFLLVLDDVWNEDRVKWVELKNLIQVGAEGSKLHSIAKMMGINTSYILELEGLFREDSLSVFVKWAFEEGEEKNYPKLMEIGKEIVQKCGGLPLALRTLGSSLFLKDDIEEWKFNRDSEIWDLPQKDDDILSAIKSYDQLPSYLKQCFACFSLFEKYFPFINFDVSVLWVAFGFLPPPNMGKTLEDISIQFLYDLQSRSFIQDFVDFGGGFCGFKLHDLVHDLSLYVARDEFQLLKFHDENIFENVLHLSFIKNDLLGLTRVPTGLRTMLFPKGANNEAFLKTLASRFKFLRVLRLAHSKYESFPRSI*KLKHLRYLNLENNKELKSLPNSVCKLQNLHTYLDGCIKLQTLPNGIGNLISLRQLYITTHQSTFPDKEIAKLSSLECLSVVSCDNLEALFLEGIHTTF* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4345 688 PANTHER OS08G0543100 PROTEIN 44 682 - -
Mtr4g4345 688 PRINTS Disease resistance protein signature 193 208 - -
Mtr4g4345 688 PRINTS Disease resistance protein signature 590 606 - -
Mtr4g4345 688 PRINTS Disease resistance protein signature 278 292 - -
Mtr4g4345 688 PRINTS Disease resistance protein signature 371 385 - -
Mtr4g4345 688 Pfam NB-ARC domain 171 396 IPR002182 GO:0043531
Mtr4g4345 688 PANTHER DISEASE RESISTANCE PROTEIN RP 44 682 IPR044974 GO:0006952
Mtr4g4345 688 CDD RX-CC_like 8 129 IPR038005 -
Mtr4g4345 688 Gene3D Ribonuclease Inhibitor 518 684 IPR032675 -
Mtr4g4345 688 Pfam Rx N-terminal domain 11 98 IPR041118 -
Mtr4g4345 688 SUPERFAMILY L domain-like 485 677 - -
Mtr4g4345 688 Gene3D - 419 507 IPR036388 -
Mtr4g4345 688 Gene3D - 148 320 IPR027417 -
Mtr4g4345 688 Gene3D - 335 418 IPR042197 -
Mtr4g4345 688 Gene3D - 10 124 - -
Mtr4g4345 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 432 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4345 Mtr-Chr4 57479240 57484642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4345 191 449 WRKY Transcription Factor Family AT5G45050 28.523 3.75e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4345 - - mtr:MTR_4g119140 1105.12