Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4323 ATGGACTGCAACAAAGAAGAGGCCTTAAGGGCCAAGGAAATCGCGGAAAAGAAGATGGAAAACAGGGATTTTGCGGGAGCTCGTAAATTTGCTCTTAAGGCTCAGCGTCTGTATCCTGTTTTGGAAAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTCTGCTGAGCAGAAAGTATTTGGTGATGAGATCAATTGGTATGGAATTCTTCAGCTAGAACGTACAGCTGGTGATGCAATGATTAAGAAGCAGTTCCGAAAGTTTGCTCTTCAACTTCATCCTGATAAAAACAAGTTTGCCGGTGCTGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTGCTTTCAGACAGAGAAAAACGAACTAGGTATGACATGAAGCTTAATGTGAACAAAACTGCTATGCCGCCGCGTTCTAATCAACCGAAGGTTCCTACGAATTTCAATTCTGCAACGAAAAACAATGTCAGGACCAATTTTACAAACTCGAACACCCAGCAGCCTCCACAGCAGCAAAATAAGCAGCCTCCGCAGCAGCAGAACGGTGTGCGCCGTACTTTCTGGACTGCCTGCCCATTTTGTTCCGTGAAGTATGAGTACTACAGAGAAATTTTGAATAAATCTCTTCGCTGTCAACAATGCCATAGGCTCTTCGTTGCATATATTCTGGATATGCAAGGTACATCACCAACAACTAACCCAAGTCAGCAAGCTTCCAAGGCGAATGTTGGATCTCAAGGCAACTCGCATGCTGAGAAGTCCAATACAAAGCCGTTCAAGAAAAAAGGCCCTGTTGGTGTCTCTAGAAAGCCAGATGTGAAGAGAAAGAGGAATCAAGTGGAAGAATTTAGTCAAAGCTCTGATTCTACAAGCAGCAGTGATTCTGAAGATGAAACAGTTGCTGGTAAGAATGGTTTTCCAGGTGTAGGAAACCATTCAACTGAGCAGCCACGTAGATCTGTGCGACAGAAGCATAATGTTTCCTACAGTGATAACATGAATGGCACTGACAATGACTTGTTACGACCTTCAAAAAGGGGTCAGGAGAATGGATCACATTGTGGTGATGGTCGAAGTTACAGGGAGACTGCTAAAACAAATGATCAGAATGGTTTAGCAGCTGATCCAAAAAATGAACATGAAAAGGTAAAACAGAAACAGGAGGAAAAGATAAGGGCAGGCGGAAAAGAAGCTGCGGAAGGGTCAAAGCAGATGGATAAAACTTTTGAGCATTCTTCTCCAGGTTCAACCTCCAAGACATCAAATTGTCCAAATGCTTATGTTTATCCTGATGCAGAGTTCAGTGATTTTGACAAGGACAGAAAAAAAGAATGTTTTGCACCTGGGCAGATTTGGGCTATCTATGATTCAATAGATGGCATGCCTAGATTCTACGCGTTAATTAGAAAAGTGCTCTCTCCTGGATTTCAGTTGCAGGCAACATGGCTTGAACCACGTCCAGATGACAATGATGAAATCAAATGGGTAGATGAGGAATTGCCTGTTGCTTGTGGGAAATTTAAACTTTGTAACACTGAAATCATTGAAGATCATCTGACGTTTTCTCATCTGGTTATGTTCAAAAGGAATGGCCGCAATACTTTTCAAGTGTATCCTAGAAAAGGAGAAACTTGGGCTCTTTTCAAAAATTGGGATATCACATGGTACAAGGATGAGGAATCTCACAGGCAGTATGAATACGAGTTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGAGGGTGTACATGTTGCATACTTAGGTAAGTTGAAAGGTTTTGTAAGCATCTTCATTCAAATTATGAAAGAAGATAACCAGCCATTTCAAATTCCATCCGCGGAGTTATTTAGATTCTCTCACAGGATTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTAGATGTTCATTTAGGATATTTAGAATTTGATCCTGCATCTTTACCAATGAATCTTGAAGAGATTGCTGTTACTCAAAATTTGGATATGAGGACTGGACATAGTTCATGTGGCAGCGAGAATGCAAGGACTTCAAAAAGATCAAAACCCTCGATGTCACCTGAAGATATTGTATCCACTCCCAAGGTCAAAGTTGACACAAGCAATTTGACTGATGTAAAGGATTCTCTTGATGATATGGATGACTGCCATGCTTCAGCTTCAACCCCAGAAGCTTTTGAAATTCCAGATGCTCAATTCTTCAACTTTGAAACTGGGAGGTCCCTTGATAAGTTCCAGGTTGGTCAAATATGGGCATTTTACAGTGATGAGGATGGAATGCCGAAATACTATGGTCAGATTAAAAAAGTTGTCACTAGTCCTACTATTGAATTGCATGTTTATTGGCTTGCTTGCTGCTGGCTGCCAGAGAATACCACTAAATGGGAAGATGACGGCATGCTTACTTCCTGTGGCAGATTTAAAGTCATCAAAACAAAAGATTTTCTCTCTATTTACAGTAACCTGTCTTGTATTTCACATCAAGTACAAGCTGATCCTATTGGCAAGAATTACACAATATATCCGAGGAAAGGGGAAGTATGGGCTCTATATAGGAAATGGTCAAATAAAATCAAGTGTTCTGACCTTAAAAATTGGGACTATGACATAGTGGAAGTTCTTGAAGTAGCTGATTTGTTTATAGAGACTTCAATTTTGGAGCATGTTACTGGTTTTAGTTCTGTTTTCAGGGGAAAGTCAATAGAAGGTTCTTCAGGCAACTTGAGAATACCAAAAAAAGAATTGCTTAGGTTCTCTCACCAAATTCCAGCTTTCAAACTAACAGAAGAGCATGGCGATCTGAGAGGCTTCTGGGAACTTGATCCGGGTGCGCTACCGCCTTCATTCCTATGGCCTTAG 2865 0.4094 MDCNKEEALRAKEIAEKKMENRDFAGARKFALKAQRLYPVLENIAQMLVVCDVHCSAEQKVFGDEINWYGILQLERTAGDAMIKKQFRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLSDREKRTRYDMKLNVNKTAMPPRSNQPKVPTNFNSATKNNVRTNFTNSNTQQPPQQQNKQPPQQQNGVRRTFWTACPFCSVKYEYYREILNKSLRCQQCHRLFVAYILDMQGTSPTTNPSQQASKANVGSQGNSHAEKSNTKPFKKKGPVGVSRKPDVKRKRNQVEEFSQSSDSTSSSDSEDETVAGKNGFPGVGNHSTEQPRRSVRQKHNVSYSDNMNGTDNDLLRPSKRGQENGSHCGDGRSYRETAKTNDQNGLAADPKNEHEKVKQKQEEKIRAGGKEAAEGSKQMDKTFEHSSPGSTSKTSNCPNAYVYPDAEFSDFDKDRKKECFAPGQIWAIYDSIDGMPRFYALIRKVLSPGFQLQATWLEPRPDDNDEIKWVDEELPVACGKFKLCNTEIIEDHLTFSHLVMFKRNGRNTFQVYPRKGETWALFKNWDITWYKDEESHRQYEYEFVEILSDYVEGEGVHVAYLGKLKGFVSIFIQIMKEDNQPFQIPSAELFRFSHRIPSFKMTGQEGVDVHLGYLEFDPASLPMNLEEIAVTQNLDMRTGHSSCGSENARTSKRSKPSMSPEDIVSTPKVKVDTSNLTDVKDSLDDMDDCHASASTPEAFEIPDAQFFNFETGRSLDKFQVGQIWAFYSDEDGMPKYYGQIKKVVTSPTIELHVYWLACCWLPENTTKWEDDGMLTSCGRFKVIKTKDFLSIYSNLSCISHQVQADPIGKNYTIYPRKGEVWALYRKWSNKIKCSDLKNWDYDIVEVLEVADLFIETSILEHVTGFSSVFRGKSIEGSSGNLRIPKKELLRFSHQIPAFKLTEEHGDLRGFWELDPGALPPSFLWP* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4323 954 MobiDBLite consensus disorder prediction 133 184 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 257 285 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 136 184 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 345 366 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 411 425 - -
Mtr4g4323 954 CDD DnaJ 67 120 IPR001623 -
Mtr4g4323 954 PANTHER - 1 952 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 377 410 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 286 302 - -
Mtr4g4323 954 Gene3D DnaJ domain 65 179 IPR036869 -
Mtr4g4323 954 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 952 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 232 256 - -
Mtr4g4323 954 Pfam Domain of unknown function (DUF3444) 429 634 IPR024593 -
Mtr4g4323 954 Pfam Domain of unknown function (DUF3444) 726 932 IPR024593 -
Mtr4g4323 954 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mtr4g4323 954 PRINTS DnaJ domain signature 87 102 IPR001623 -
Mtr4g4323 954 PRINTS DnaJ domain signature 103 123 IPR001623 -
Mtr4g4323 954 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Mtr4g4323 954 SMART dnaj_3 66 123 IPR001623 -
Mtr4g4323 954 Pfam DnaJ domain 67 128 IPR001623 -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 329 344 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 665 695 - -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 665 690 - -
Mtr4g4323 954 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Mtr4g4323 954 MobiDBLite consensus disorder prediction 232 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4323 Mtr-Chr4 57293431 57298650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4323 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.556 5.41e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4323 - - mtr:MTR_4g118660 1934.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4323 4 57293431 57298650 Mtr4g4323 4 57293431 57298650 ECH
Mtr4g4323 4 57293431 57298650 Mtr2g0680 2 6862084 6867648 PCT